RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 DHX58Q96C10 678 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 CHFRQ96EP1 664 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 ECT2Q9H8V3 914 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 SEMA4GQ9NTN9 838 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 C2orf42Q9NWW7 574 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 DUS2Q9NX74 493 aaKnown RBP16.04■□□□□ 0.16
RNF40-209ENST00000566703 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
RNF40-209ENST00000566703 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 TCHHQ07283 1943 aa16.04■□□□□ 0.16
RNF40-209ENST00000566703 UBE4BO95155 1302 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 PTPRJQ12913 1337 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 ATP2C2O75185 946 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 TACC1O75410 805 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 AKAP3O75969 853 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 CKMP06732 381 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 HDCP19113 662 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 GJA4P35212 333 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 PPP3CCP48454 512 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 USP4Q13107 963 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 PSMD6Q15008 389 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 ZNF77Q15935 545 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 SHC4Q6S5L8 630 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 UNC13DQ70J99 1090 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 FAM160A2Q8N612 972 aaPredicted RBP16.03■□□□□ 0.16
RNF40-209ENST00000566703 XXYLT1Q8NBI6 393 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 STKLD1Q8NE28 680 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 CCDC26Q8TAB7 109 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 MYCBPAPQ8TBZ2 947 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 GAB3Q8WWW8 586 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 ATP2A3Q93084 1043 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 HPS3Q969F9 1004 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 FAM84AQ96KN4 292 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 FNBP1Q96RU3 617 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 CYP2S1Q96SQ9 504 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 P2RY13Q9BPV8 354 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 AGPAT3Q9NRZ7 376 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 ARHGAP26Q9UNA1 814 aa16.03■□□□□ 0.16
RNF40-209ENST00000566703 PVALEFA0A1B0GWK0 134 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 SLC30A4O14863 429 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 TRIM66O15016 1216 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 HCRTO43612 131 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 STAU1O95793 577 aaKnown RBP16.02■□□□□ 0.16
RNF40-209ENST00000566703 CST3P01034 146 aaPredicted RBP16.02■□□□□ 0.16
RNF40-209ENST00000566703 PDGFRBP09619 1106 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 TNNI1P19237 187 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 GNL1P36915 607 aaPredicted RBP16.02■□□□□ 0.16
RNF40-209ENST00000566703 GRIK1P39086 918 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 IFNAR2P48551 515 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 EHHADHQ08426 723 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 SRSF5Q13243 272 aaKnown RBP16.02■□□□□ 0.16
RNF40-209ENST00000566703 SNRNP35Q16560 246 aaKnown RBP16.02■□□□□ 0.16
RNF40-209ENST00000566703 ATL3Q6DD88 541 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 PRR23CQ6ZRP0 262 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 DENND5BQ6ZUT9 1274 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 HS2ST1Q7LGA3 356 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 CACNA2D4Q7Z3S7 1137 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 ARL14EPQ8N8R7 260 aaPredicted RBP16.02■□□□□ 0.16
RNF40-209ENST00000566703 SNX21Q969T3 373 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 C8orf48Q96LL4 319 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 MMS19Q96T76 1030 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 TTLL2Q9BWV7 592 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 FBRSL1Q9HCM7 1045 aaKnown RBP16.02■□□□□ 0.16
RNF40-209ENST00000566703 TRPC7Q9HCX4 862 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 CRTAC1Q9NQ79 661 aa16.02■□□□□ 0.16
RNF40-209ENST00000566703 ZNF292O60281 2723 aa16.02■□□□□ 0.15
RNF40-209ENST00000566703 DMDP11532 3685 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 RNF40O75150 1001 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 EGFP01133 1207 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 BDNFP23560 247 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 ANXA13P27216 316 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 ATICP31939 592 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 NOP14P78316 857 aaKnown RBP16.01■□□□□ 0.15
RNF40-209ENST00000566703 CYP24A1Q07973 514 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 KCNB1Q14721 858 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 CCDC142Q17RM4 750 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 EML3Q32P44 896 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 PKN3Q6P5Z2 889 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 C12orf56Q8IXR9 622 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 RDH13Q8NBN7 331 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 SH3RF2Q8TEC5 729 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 SCFD1Q8WVM8 642 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 CD101Q93033 1021 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 MYLPFQ96A32 169 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 PCED1BQ96HM7 432 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 SLC22A12Q96S37 553 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 CGRRF1Q99675 332 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 SNX25Q9H3E2 840 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 TRPM5Q9NZQ8 1165 aa16.01■□□□□ 0.15
RNF40-209ENST00000566703 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.01■□□□□ 0.15
RNF40-209ENST00000566703 C2orf78A6NCI8 922 aa16■□□□□ 0.15
RNF40-209ENST00000566703 POLR2DO15514 142 aaKnown RBP16■□□□□ 0.15
RNF40-209ENST00000566703 RPP40O75818 363 aaKnown RBP16■□□□□ 0.15
RNF40-209ENST00000566703 DLATP10515 647 aaKnown RBP16■□□□□ 0.15
RNF40-209ENST00000566703 PSMC1P62191 440 aaKnown RBP16■□□□□ 0.15
RNF40-209ENST00000566703 CYP27A1Q02318 531 aa16■□□□□ 0.15
RNF40-209ENST00000566703 BMT2Q1RMZ1 405 aa16■□□□□ 0.15
RNF40-209ENST00000566703 SYT13Q7L8C5 426 aa16■□□□□ 0.15
RNF40-209ENST00000566703 ZC3H10Q96K80 434 aaKnown RBP16■□□□□ 0.15
RNF40-209ENST00000566703 MRPL45Q9BRJ2 306 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms