RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 KCNT1Q5JUK3 1230 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 SMYD5Q6GMV2 418 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 OR6B2Q6IFH4 312 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 ZNF280BQ86YH2 543 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 RHOT1Q8IXI2 618 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 FUKQ8N0W3 1084 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 TOP6BLQ8N6T0 577 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 DBF4BQ8NFT6 615 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00562-201ENST00000566385 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
LINC00562-201ENST00000566385 FAM118BQ9BPY3 351 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 MIS12Q9H081 205 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 DDX43Q9NXZ2 648 aaKnown RBP11.96□□□□□ -0.49
LINC00562-201ENST00000566385 SQORQ9Y6N5 450 aa11.96□□□□□ -0.49
LINC00562-201ENST00000566385 CCDC188H7C350 402 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 PAPSS1O43252 624 aaPredicted RBP11.96□□□□□ -0.5
LINC00562-201ENST00000566385 LRCH4O75427 683 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 DDHD2O94830 711 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 WARSP23381 471 aaKnown RBP11.96□□□□□ -0.5
LINC00562-201ENST00000566385 PSMA2P25787 234 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 KCNJ1P48048 391 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 GSCP56915 257 aaPredicted RBP11.96□□□□□ -0.5
LINC00562-201ENST00000566385 GLE1Q53GS7 698 aaKnown RBP11.96□□□□□ -0.5
LINC00562-201ENST00000566385 CLLU1OSQ5K130 101 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 ARHGAP17Q68EM7 881 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 CCDC70Q6NSX1 233 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 CASKIN2Q8WXE0 1202 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 IFT81Q8WYA0 676 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 CRTAC1Q9NQ79 661 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 HESX1Q9UBX0 185 aa11.96□□□□□ -0.5
LINC00562-201ENST00000566385 CAND2O75155 1236 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 RALAP11233 206 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 KRT10P13645 584 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
LINC00562-201ENST00000566385 C15orf59Q2T9L4 293 aaPredicted RBP11.95□□□□□ -0.5
LINC00562-201ENST00000566385 OLFML1Q6UWY5 402 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 DSTYKQ6XUX3 929 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 SLC24A5Q71RS6 500 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 TMEM110Q86TL2 294 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 CCDC50Q8IVM0 306 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 ANKRD52Q8NB46 1076 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 C1orf54Q8WWF1 131 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 ATG4AQ8WYN0 398 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 RAPGEF5Q92565 580 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 NDRG1Q92597 394 aaKnown RBP11.95□□□□□ -0.5
LINC00562-201ENST00000566385 SCLYQ96I15 445 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 TRIM51Q9BSJ1 452 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 GDF3Q9NR23 364 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 TMEM30AQ9NV96 361 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 OGDHLQ9ULD0 1010 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 NFU1Q9UMS0 254 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 MYBPHLA2RUH7 354 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 PSTPIP1O43586 416 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 FAM153BP0C7A2 387 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 SELPP16109 830 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 PTPN1P18031 435 aaKnown RBP11.95□□□□□ -0.5
LINC00562-201ENST00000566385 MAN1A1P33908 653 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 PIGHQ14442 188 aaPredicted RBP11.95□□□□□ -0.5
LINC00562-201ENST00000566385 STILQ15468 1287 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 FAM153CQ494X1 144 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 MDH1BQ5I0G3 518 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 PGBD4Q96DM1 585 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 CFAP57Q96MR6 1250 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 WDR35Q9P2L0 1181 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 PCSK1NQ9UHG2 260 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 FAM153AQ9UHL3 310 aa11.95□□□□□ -0.5
LINC00562-201ENST00000566385 R3HDM2Q9Y2K5 976 aaKnown RBP11.95□□□□□ -0.5
LINC00562-201ENST00000566385 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00562-201ENST00000566385 FSCN2O14926 492 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 ERLIN1O75477 346 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 LCP1P13796 627 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 TFE3P19532 575 aaPredicted RBP11.94□□□□□ -0.5
LINC00562-201ENST00000566385 AARSP49588 968 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00562-201ENST00000566385 CACNA2D1P54289 1103 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 SLC25A11Q02978 314 aaKnown RBP11.94□□□□□ -0.5
LINC00562-201ENST00000566385 TAP1Q03518 808 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 GRIK3Q13003 919 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 TUSC3Q13454 348 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 CDO1Q16878 200 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 ZFYVE27Q5T4F4 411 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 MFSD7Q6UXD7 560 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 MTERF4Q7Z6M4 381 aaKnown RBP11.94□□□□□ -0.5
LINC00562-201ENST00000566385 KATNAL2Q8IYT4 538 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 NIPA2Q8N8Q9 360 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 IPO4Q8TEX9 1081 aaKnown RBP11.94□□□□□ -0.5
LINC00562-201ENST00000566385 TNIP3Q96KP6 325 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 NAP1L3Q99457 506 aaPredicted RBP11.94□□□□□ -0.5
LINC00562-201ENST00000566385 RTP3Q9BQQ7 232 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 RHOBTB2Q9BYZ6 727 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 TRIM31Q9BZY9 425 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 ZWILCHQ9H900 591 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 CHST7Q9NS84 486 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 DNAJB4Q9UDY4 337 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 C2CD4BA6NLJ0 364 aa11.94□□□□□ -0.5
LINC00562-201ENST00000566385 RPL9P32969 192 aaKnown RBP11.94□□□□□ -0.5
LINC00562-201ENST00000566385 GATMP50440 423 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms