RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 S1PR5Q9H228 398 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 CYP4F11Q9HBI6 524 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 CSNK1G1Q9HCP0 422 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 PRDM6Q9NQX0 595 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 ZDHHC7Q9NXF8 308 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 NOCTQ9UK39 431 aaKnown RBP8.67□□□□□ -1.02
CDH13-208ENST00000566333 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDH13-208ENST00000566333 SLC27A5Q9Y2P5 690 aa8.67□□□□□ -1.02
CDH13-208ENST00000566333 COL4A3Q01955 1670 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 A0A1W2PQJ5 194 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 HHLA1C9JL84 531 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 F8VP50 259 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 H3BQ06 376 aaPredicted RBP8.66□□□□□ -1.02
CDH13-208ENST00000566333 PRRG1O14668 218 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CCL16O15467 120 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CBFA2T2O43439 604 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 NCK2O43639 380 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 TADA3O75528 432 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CFHP08603 1231 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 HNRNPA1P09651 372 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDH13-208ENST00000566333 VDRP11473 427 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CD19P15391 556 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 NPR3P17342 541 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 TRIM21P19474 475 aaKnown RBP8.66□□□□□ -1.02
CDH13-208ENST00000566333 KCNA5P22460 613 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 ADORA2BP29275 332 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 GNA15P30679 374 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 SOX5P35711 763 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 ZNF75DP51815 510 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 TWF1Q12792 350 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CLUL1Q15846 466 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 GOLGA7BQ2TAP0 167 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 UVSSAQ2YD98 709 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 MGAT5BQ3V5L5 792 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 SGO2Q562F6 1265 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 PPM1LQ5SGD2 360 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 RARS2Q5T160 578 aaKnown RBP8.66□□□□□ -1.02
CDH13-208ENST00000566333 SDHAF4Q5VUM1 108 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 VSTM1Q6UX27 236 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 TMC5Q6UXY8 1006 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CLEC20AQ6ZU45 233 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CCDC149Q6ZUS6 474 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 RTL10Q7L3V2 364 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 GPRIN1Q7Z2K8 1008 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 SLC47A2Q86VL8 602 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 TMC8Q8IU68 726 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 DDX1Q92499 740 aaKnown RBP8.66□□□□□ -1.02
CDH13-208ENST00000566333 SUSD6Q92537 303 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CYFIP2Q96F07 1278 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
CDH13-208ENST00000566333 SYT11Q9BT88 431 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 APOL5Q9BWW9 433 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 LRRC3Q9BY71 257 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 PRKD2Q9BZL6 878 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 DMAP1Q9NPF5 467 aaPredicted RBP8.66□□□□□ -1.02
CDH13-208ENST00000566333 TSPAN16Q9UKR8 245 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 COL4A2P08572 1712 aa8.66□□□□□ -1.02
CDH13-208ENST00000566333 CUL9Q8IWT3 2517 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 MYO10Q9HD67 2058 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 ATP8B3O60423 1300 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 CCDC195A0A1B0GUA6 201 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 LRRC53A6NM62 1247 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 TULP2O00295 520 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 TNFRSF10BO14763 440 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 AP1G2O75843 785 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 GFPT2O94808 682 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 MICAL2O94851 1124 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 TPM3P06753 285 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 FAM200BP0CF97 657 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 SRGAP2BP0DMP2 458 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 CYP11B1P15538 503 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 HMGA1P17096 107 aaKnown RBP8.65□□□□□ -1.02
CDH13-208ENST00000566333 HOXB8P17481 243 aaPredicted RBP8.65□□□□□ -1.02
CDH13-208ENST00000566333 ELF1P32519 619 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 SSTR3P32745 418 aaPredicted RBP8.65□□□□□ -1.02
CDH13-208ENST00000566333 USP8P40818 1118 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 BCAT1P54687 386 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 EPHA5P54756 1037 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 USP46P62068 366 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 TFF2Q03403 129 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 TBX2Q13207 712 aaPredicted RBP8.65□□□□□ -1.02
CDH13-208ENST00000566333 MTMR3Q13615 1198 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 ARID5BQ14865 1188 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
CDH13-208ENST00000566333 MEA1Q16626 185 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 DDR2Q16832 855 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 SLC5A9Q2M3M2 681 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 SPECC1LQ69YQ0 1117 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 LCLAT1Q6UWP7 414 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 GPR149Q86SP6 731 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 NOP9Q86U38 636 aaKnown RBP8.65□□□□□ -1.02
CDH13-208ENST00000566333 GPR152Q8TDT2 470 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 SLC20A1Q8WUM9 679 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 HLA-CQ95604 372 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 PSMG2Q969U7 264 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 MRFAP1L1Q96HT8 127 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 SPATA17Q96L03 361 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 C8orf48Q96LL4 319 aa8.65□□□□□ -1.02
CDH13-208ENST00000566333 HEXIM2Q96MH2 286 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms