RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 PDE6CP51160 858 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 KCNB1Q14721 858 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 SURF1Q15526 300 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 CD101Q93033 1021 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 CHFRQ96EP1 664 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 FAM84AQ96KN4 292 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 HHIPQ96QV1 700 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 SYT15Q9BQS2 421 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 ECT2Q9H8V3 914 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 SIX4Q9UIU6 781 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 EML5Q05BV3 1969 aa17.7■□□□□ 0.42
TSR3-202ENST00000566296 MAP1BP46821 2468 aaKnown RBP17.69■□□□□ 0.42
TSR3-202ENST00000566296 GABRDO14764 452 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 MAGEA11P43364 429 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 GALK1P51570 392 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 LIMK1P53667 647 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 NR1H3Q13133 447 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 PSMD2Q13200 908 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 MAPRE1Q15691 268 aaKnown RBP17.69■□□□□ 0.42
TSR3-202ENST00000566296 CCDC142Q17RM4 750 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 LMBRD2Q68DH5 695 aaPredicted RBP17.69■□□□□ 0.42
TSR3-202ENST00000566296 FAM173BQ6P4H8 233 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 DPH6Q7L8W6 267 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 KBTBD6Q86V97 674 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 RPLP0P6Q8NHW5 317 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 CXorf38Q8TB03 319 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 MYLPFQ96A32 169 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 IPO9Q96P70 1041 aaKnown RBP17.69■□□□□ 0.42
TSR3-202ENST00000566296 FGFBP2Q9BYJ0 223 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 INTS13Q9NVM9 706 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 PCDHGA5Q9Y5G8 931 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 WNT6Q9Y6F9 365 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 MORC2Q9Y6X9 1032 aaPredicted RBP17.69■□□□□ 0.42
TSR3-202ENST00000566296 MYO16Q9Y6X6 1858 aa17.69■□□□□ 0.42
TSR3-202ENST00000566296 KIAA1549LQ6ZVL6 1849 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 ZNF233A6NK53 670 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 HCRTO43612 131 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 APBB3O95704 486 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 ZNF806P0C7X5 589 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 SYT1P21579 422 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 ANXA13P27216 316 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 RAP1GAPP47736 663 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 PSMC1P62191 440 aaKnown RBP17.68■□□□□ 0.42
TSR3-202ENST00000566296 SF3A2Q15428 464 aaKnown RBP17.68■□□□□ 0.42
TSR3-202ENST00000566296 SOWAHAQ2M3V2 549 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 ARL14EPQ8N8R7 260 aaPredicted RBP17.68■□□□□ 0.42
TSR3-202ENST00000566296 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 SH3RF2Q8TEC5 729 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 HPDLQ96IR7 371 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 MAGEC2Q9UBF1 373 aaPredicted RBP17.68■□□□□ 0.42
TSR3-202ENST00000566296 CDH9Q9ULB4 789 aa17.68■□□□□ 0.42
TSR3-202ENST00000566296 PTPRDP23468 1912 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 STX6O43752 255 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 NFATC1O95644 943 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 MPLP40238 635 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 ELF2Q15723 593 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 CCDC6Q16204 474 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 DUOXA2Q1HG44 320 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 EML3Q32P44 896 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 NAIF1Q69YI7 327 aaPredicted RBP17.67■□□□□ 0.42
TSR3-202ENST00000566296 FAM171BQ6P995 826 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 VSTM1Q6UX27 236 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 SYT13Q7L8C5 426 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 PDILTQ8N807 584 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 SLC22A12Q96S37 553 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 PANK2Q9BZ23 570 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 LRRC27Q9C0I9 530 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 TNMDQ9H2S6 317 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 FBRSL1Q9HCM7 1045 aaKnown RBP17.67■□□□□ 0.42
TSR3-202ENST00000566296 EHD2Q9NZN4 543 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 GCNT4Q9P109 453 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 ARHGAP26Q9UNA1 814 aa17.67■□□□□ 0.42
TSR3-202ENST00000566296 A0A087X0B3 334 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 TCF3P15923 654 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 PFKLP17858 780 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 HDCP19113 662 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 WARSP23381 471 aaKnown RBP17.66■□□□□ 0.42
TSR3-202ENST00000566296 GRIK1P39086 918 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 CYP27A1Q02318 531 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 DMC1Q14565 340 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 SLC39A14Q15043 492 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 STK38Q15208 465 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 DENND5BQ6ZUT9 1274 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 CBWD2Q8IUF1 395 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 WDR49Q8IV35 697 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 OR5B17Q8NGF7 314 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 SPATA17Q96L03 361 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 CEP295NLQ96MC4 621 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 CYP2S1Q96SQ9 504 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 KIAA1586Q9HCI6 787 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 VPS45Q9NRW7 570 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 TRPM5Q9NZQ8 1165 aa17.66■□□□□ 0.42
TSR3-202ENST00000566296 CHD8Q9HCK8 2581 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 C2orf78A6NCI8 922 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 TRIM66O15016 1216 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 RHOBTB1O94844 696 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 BDNFP23560 247 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 PLK5Q496M5 336 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 SCARA3Q6AZY7 606 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms