RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 FAM102AQ5T9C2 384 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 INTS11Q5TA45 600 aaKnown RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 MANEALQ5VSG8 457 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 AGAP9Q5VTM2 703 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 SPATA31D4Q6ZUB0 917 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 GSPT2Q8IYD1 628 aaKnown RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 PPHLN1Q8NEY8 458 aaKnown RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 OR1N1Q8NGS0 311 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 SPPL3Q8TCT6 385 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 ZNF483Q8TF39 744 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 MIEF2Q96C03 454 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 FAM227BQ96M60 508 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 NEU1Q99519 415 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 SMOC2Q9H3U7 446 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 MAP3K20Q9NYL2 800 aaKnown RBP5.84□□□□□ -1.47
CNOT1-209ENST00000566240 TMOD4Q9NZQ9 345 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 HSFX1Q9UBD0 423 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 HPSEQ9Y251 543 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 CRYL1Q9Y2S2 319 aa5.84□□□□□ -1.47
CNOT1-209ENST00000566240 HMX3A6NHT5 357 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 B9A039 149 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 hCG_1984214I3L0E3 225 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 J3KRW8 73 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 EYA2O00167 538 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 RGS10O43665 173 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 SOAT2O75908 522 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 RAD17O75943 681 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 FAM155BO75949 473 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 ACTL6BO94805 426 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 NTSR2O95665 410 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 SRGAP2BP0DMP2 458 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 CKMT1AP12532 417 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 GYS1P13807 737 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 KCNA3P22001 575 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 CST5P28325 142 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-209ENST00000566240 PNLIPRP1P54315 467 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 MYO1EQ12965 1108 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 ADCK5Q3MIX3 580 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 ANKRD45Q5TZF3 282 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 SPTY2D1Q68D10 685 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-209ENST00000566240 TMEM108Q6UXF1 575 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-209ENST00000566240 ANKRD35Q8N283 1001 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 SKA1Q96BD8 255 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 MED15Q96RN5 788 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 RBM15Q96T37 977 aaKnown RBP eCLIP5.83□□□□□ -1.481e-6■■□□□ 14.5
CNOT1-209ENST00000566240 SLC25A32Q9H2D1 315 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 PABPC3Q9H361 631 aaKnown RBP5.83□□□□□ -1.48
CNOT1-209ENST00000566240 TP63Q9H3D4 680 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-209ENST00000566240 RNPEPQ9H4A4 650 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 ZHX3Q9H4I2 956 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 HELLSQ9NRZ9 838 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 CTTNBP2NLQ9P2B4 639 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 MRPS17Q9Y2R5 130 aaKnown RBP5.83□□□□□ -1.48
CNOT1-209ENST00000566240 SLC30A1Q9Y6M5 507 aa5.83□□□□□ -1.48
CNOT1-209ENST00000566240 AATKQ6ZMQ8 1374 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 A0A1B0GTW7 788 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 CCDC78A2IDD5 438 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 E7ENX8 843 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 DNPH1O43598 174 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 CCNT2O60583 730 aaKnown RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 SUN1O94901 812 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 KCNA2P16389 499 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 CNTFP26441 200 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 SLC5A2P31639 672 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 ADD2P35612 726 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 RABGGTBP53611 331 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 PRKAG1P54619 331 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 ALDH18A1P54886 795 aaKnown RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 AP2B1P63010 937 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 TAP2Q03519 686 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 FAM110CQ1W6H9 321 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 PTCHD3Q3KNS1 767 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 C1QL3Q5VWW1 255 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 TCTN3Q6NUS6 607 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 RASGRP3Q8IV61 690 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 SLC44A2Q8IWA5 706 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 FUKQ8N0W3 1084 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 SPARTQ8N0X7 666 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 OR56A1Q8NGH5 318 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 RILPL2Q969X0 211 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 PYM1Q9BRP8 204 aaKnown RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 RTKNQ9BST9 563 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 DDX23Q9BUQ8 820 aaKnown RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 PTDSS2Q9BVG9 487 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 TRIM5Q9C035 493 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 EPS8L2Q9H6S3 715 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 RIC8AQ9NPQ8 531 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 PRDM8Q9NQV8 689 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 VPS45Q9NRW7 570 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 GGA3Q9NZ52 723 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 LPAR3Q9UBY5 353 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 FBXO9Q9UK97 447 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 ZFR2Q9UPR6 939 aaKnown RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 NEU2Q9Y3R4 380 aa5.82□□□□□ -1.48
CNOT1-209ENST00000566240 USP15Q9Y4E8 981 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-209ENST00000566240 OR2W5A6NFC9 320 aa5.81□□□□□ -1.48
CNOT1-209ENST00000566240 TOR1BO14657 336 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms