RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 DUSP9Q99956 384 aaKnown RBP16.22■□□□□ 0.19
CMTM3-212ENST00000566121 CRTAC1Q9NQ79 661 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 GKN1Q9NS71 199 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 GTSE1Q9NYZ3 720 aa16.22■□□□□ 0.19
CMTM3-212ENST00000566121 CHURC1-FNTBB4DL54 471 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 TRIM66O15016 1216 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 RPN1P04843 607 aaKnown RBP16.21■□□□□ 0.19
CMTM3-212ENST00000566121 SDHBP21912 280 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 ACAT1P24752 427 aaKnown RBP16.21■□□□□ 0.19
CMTM3-212ENST00000566121 ID4P47928 161 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 STK4Q13043 487 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 WDR44Q5JSH3 913 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 LMBRD2Q68DH5 695 aaPredicted RBP16.21■□□□□ 0.19
CMTM3-212ENST00000566121 TXNDC8Q6A555 127 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 DENND5BQ6ZUT9 1274 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 TAF4BQ92750 862 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 SECISBP2LQ93073 1101 aaKnown RBP16.21■□□□□ 0.19
CMTM3-212ENST00000566121 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 HPS4Q9NQG7 708 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 ARHGAP26Q9UNA1 814 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 ATP6V1DQ9Y5K8 247 aa16.21■□□□□ 0.19
CMTM3-212ENST00000566121 TRAV19A0A0A6YYK7 116 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 A0A1W2PQ27 194 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 A0A1W2PQ64 194 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 A0A1W2PQD8 194 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 K7ESF4 209 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 CLIC2O15247 247 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 EXOC3O60645 756 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 ATG13O75143 517 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 KIF20AO95235 890 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 C4BPAP04003 597 aaKnown RBP16.2■□□□□ 0.18
CMTM3-212ENST00000566121 DLATP10515 647 aaKnown RBP16.2■□□□□ 0.18
CMTM3-212ENST00000566121 DRD1P21728 446 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 KRT85P78386 507 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 PKP1Q13835 747 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 ZNF77Q15935 545 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 WDR72Q3MJ13 1102 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 FBXO43Q4G163 708 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 LONP2Q86WA8 852 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 RDH13Q8NBN7 331 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 CCDC26Q8TAB7 109 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 TMC2Q8TDI7 906 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 OSCP1Q8WVF1 389 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 OVCA2Q8WZ82 227 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 PCED1BQ96HM7 432 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 ELOVL4Q9GZR5 314 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 SCAND2PQ9GZW5 306 aaPredicted RBP16.2■□□□□ 0.18
CMTM3-212ENST00000566121 BLZF1Q9H2G9 400 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 SNX25Q9H3E2 840 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 COMMD8Q9NX08 183 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 DLL3Q9NYJ7 618 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 IL37Q9NZH6 218 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 SERTAD1Q9UHV2 236 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 TRAF3IP3Q9Y228 551 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 CCL26Q9Y258 94 aa16.2■□□□□ 0.18
CMTM3-212ENST00000566121 ATP2C2O75185 946 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 OLFM2O95897 454 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 PTPN1P18031 435 aaKnown RBP16.19■□□□□ 0.18
CMTM3-212ENST00000566121 AFMP43652 599 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 GPR15P49685 360 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 CYP2J2P51589 502 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 TNNC1P63316 161 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 SLC7A9P82251 487 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 USP4Q13107 963 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 TRPC3Q13507 836 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 SNX30Q5VWJ9 437 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 CC2D1AQ6P1N0 951 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-212ENST00000566121 NELFCDQ8IXH7 590 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 KIAA0895Q8NCT3 520 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 MYLPFQ96A32 169 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 CCDC127Q96BQ5 260 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 FAXDC2Q96IV6 333 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 ZFYVE19Q96K21 471 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 MMS19Q96T76 1030 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 TRPM5Q9NZQ8 1165 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 MAGED2Q9UNF1 606 aaPredicted RBP16.19■□□□□ 0.18
CMTM3-212ENST00000566121 SMG5Q9UPR3 1016 aaKnown RBP16.19■□□□□ 0.18
CMTM3-212ENST00000566121 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
CMTM3-212ENST00000566121 GREB1Q4ZG55 1949 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 FAM92AA1XBS5 289 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 PRR5-ARHGAP8B1AHC4 643 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 FOXD2O60548 495 aaPredicted RBP16.18■□□□□ 0.18
CMTM3-212ENST00000566121 RHOBTB3O94955 611 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 TGM1P22735 817 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 BDNFP23560 247 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 CASP1P29466 404 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 SOX9P48436 509 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 ARHGAP8P85298 464 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 TNK2Q07912 1038 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 GRSF1Q12849 480 aaKnown RBP eCLIP16.18■□□□□ 0.18
CMTM3-212ENST00000566121 PUM1Q14671 1186 aaKnown RBP eCLIP16.18■□□□□ 0.18
CMTM3-212ENST00000566121 MTF1Q14872 753 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 SGSM1Q2NKQ1 1148 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 ZACNQ401N2 412 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 LAIR1Q6GTX8 287 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 CAMKK1Q8N5S9 505 aa16.18■□□□□ 0.18
CMTM3-212ENST00000566121 NOC3LQ8WTT2 800 aaKnown RBP16.18■□□□□ 0.18
CMTM3-212ENST00000566121 ATP2A3Q93084 1043 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms