RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 RPS16P62249 146 aaKnown RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 CREMQ03060 361 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 BOP1Q14137 746 aaKnown RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 EIF4A2Q14240 407 aaKnown RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 BRD3Q15059 726 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 FKBP15Q5T1M5 1219 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 DARS2Q6PI48 645 aaKnown RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 FAM124AQ86V42 546 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 TTC5Q8N0Z6 440 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 FAM43AQ8N2R8 423 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 ARL8AQ96BM9 186 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 STRBPQ96SI9 672 aaKnown RBP4.94□□□□□ -1.62
LINC00561-201ENST00000565815 SMOC2Q9H3U7 446 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 SACM1LQ9NTJ5 587 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 TPCN1Q9ULQ1 816 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 DMTF1Q9Y222 760 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 SNX13Q9Y5W8 968 aa4.94□□□□□ -1.62
LINC00561-201ENST00000565815 GOLIM4O00461 696 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 EIF5BO60841 1220 aaKnown RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 DNAJB5O75953 348 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 GASTP01350 101 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 FCER1AP12319 257 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ABCB4P21439 1286 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ZNF135P52742 658 aaPredicted RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 FMO1Q01740 532 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 CTBP1Q13363 440 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ICAM4Q14773 271 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 RRAGBQ5VZM2 374 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 RGMBQ6NW40 437 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ZNF585AQ6P3V2 769 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 FBXO46Q6PJ61 603 aaPredicted RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 C20orf173Q96LM9 149 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 KLHL32Q96NJ5 620 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 COL20A1Q9P218 1284 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 POLKQ9UBT6 870 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ST6GALNAC2Q9UJ37 374 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ISY1Q9ULR0 285 aaKnown RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ZNF541Q9H0D2 1346 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 TBKBP1A7MCY6 615 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 PLIN1O60240 522 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ZKSCAN1P17029 563 aaPredicted RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 APOBEC3AP31941 199 aaPredicted RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 MMP14P50281 582 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 FAM193AP78312 1265 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 MC2RQ01718 297 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 PMS2P11Q13670 270 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 RAB39AQ14964 217 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 CC2D1BQ5T0F9 858 aaKnown RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 LGI4Q8N135 537 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ATXN2LQ8WWM7 1075 aaKnown RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 TFAP2CQ92754 450 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 TTC17Q96AE7 1141 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 CRAMP1Q96RY5 1269 aa4.93□□□□□ -1.62
LINC00561-201ENST00000565815 UPF2Q9HAU5 1272 aaKnown RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 ZFR2Q9UPR6 939 aaKnown RBP4.93□□□□□ -1.62
LINC00561-201ENST00000565815 POM121BA6NF01 834 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 M0QYG6 137 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 RNMTO43148 476 aaKnown RBP4.92□□□□□ -1.62
LINC00561-201ENST00000565815 TPD52L2O43399 206 aaKnown RBP4.92□□□□□ -1.62
LINC00561-201ENST00000565815 CELF2O95319 508 aaKnown RBP4.92□□□□□ -1.62
LINC00561-201ENST00000565815 GJB1P08034 283 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 TNFSF4P23510 183 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 SMARCA1P28370 1054 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 SP140Q13342 867 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 FGL2Q14314 439 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 UBXN2BQ14CS0 331 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 ARHGEF6Q15052 776 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 DACT2Q5SW24 774 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 CST9Q5W186 159 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 TBC1D9BQ66K14 1250 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 PPP4R3AQ6IN85 833 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 BORAQ6PGQ7 559 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 SRGAP1Q7Z6B7 1085 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 SPICE1Q8N0Z3 855 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 PDPRQ8NCN5 879 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 TBC1D15Q8TC07 691 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 ZCCHC4Q9H5U6 513 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 GPRC5BQ9NZH0 403 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 CDYLQ9Y232 598 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 LAS1LQ9Y4W2 734 aaKnown RBP4.92□□□□□ -1.62
LINC00561-201ENST00000565815 PCDHGB2Q9Y5G2 931 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 COL11A2P13942 1736 aaPredicted RBP4.92□□□□□ -1.62
LINC00561-201ENST00000565815 SLX4Q8IY92 1834 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 RHPN2P1A8MT19 583 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 UNC5CO95185 931 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 TSHRP16473 764 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 FAM189BP81408 668 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 KIAA2012Q0VF49 1180 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 FAM180AQ6UWF9 173 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 SLC30A10Q6XR72 485 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 WDR63Q8IWG1 891 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 CASKIN2Q8WXE0 1202 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 RBM17Q96I25 401 aaKnown RBP4.92□□□□□ -1.62
LINC00561-201ENST00000565815 KLHL11Q9NVR0 708 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 HDAC9Q9UKV0 1011 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 ZBTB1Q9Y2K1 713 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 UBR2Q8IWV8 1755 aa4.92□□□□□ -1.62
LINC00561-201ENST00000565815 DBX1A6NMT0 343 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 DRGXA6NNA5 263 aa4.91□□□□□ -1.62
LINC00561-201ENST00000565815 PTMSP20962 102 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms