RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 PCED1BQ96HM7 432 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 SPATA17Q96L03 361 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 VRTNQ9H8Y1 702 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 HPS4Q9NQG7 708 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 GKN1Q9NS71 199 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
CDH3-204ENST00000565453 TDP1Q9NUW8 608 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 THG1LQ9NWX6 298 aaKnown RBP16.74■□□□□ 0.27
CDH3-204ENST00000565453 GREB1Q4ZG55 1949 aa16.74■□□□□ 0.27
CDH3-204ENST00000565453 C4BPAP04003 597 aaKnown RBP16.73■□□□□ 0.27
CDH3-204ENST00000565453 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 BDNFP23560 247 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 GNL1P36915 607 aaPredicted RBP16.73■□□□□ 0.27
CDH3-204ENST00000565453 SYKP43405 635 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 NDUFA8P51970 172 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 MAPRE1Q15691 268 aaKnown RBP16.73■□□□□ 0.27
CDH3-204ENST00000565453 TDRD10Q5VZ19 366 aaKnown RBP16.73■□□□□ 0.27
CDH3-204ENST00000565453 CHFRQ96EP1 664 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 CEP295NLQ96MC4 621 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 SLC22A12Q96S37 553 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 SNX25Q9H3E2 840 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 GCNT4Q9P109 453 aa16.73■□□□□ 0.27
CDH3-204ENST00000565453 PTPRZ1P23471 2315 aaPredicted RBP16.73■□□□□ 0.27
CDH3-204ENST00000565453 OTOL1A6NHN0 477 aaPredicted RBP16.72■□□□□ 0.27
CDH3-204ENST00000565453 PDXKO00764 312 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 VNN1O95497 513 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 RPN1P04843 607 aaKnown RBP16.72■□□□□ 0.27
CDH3-204ENST00000565453 CCR3P51677 355 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 AP3M2P53677 418 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 TNNC1P63316 161 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 SATB1Q01826 763 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 CYP27A1Q02318 531 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 USP4Q13107 963 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 TRPC3Q13507 836 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 CCINQ13939 588 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 LRRC32Q14392 662 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 PON2Q15165 354 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 ITPRIPL2Q3MIP1 535 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 MDH1BQ5I0G3 518 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 DGKKQ5KSL6 1271 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 TRIM68Q6AZZ1 485 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 SPEM1Q8N4L4 309 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 OR6B3Q8NGW1 331 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 SYAP1Q96A49 352 aaPredicted RBP16.72■□□□□ 0.27
CDH3-204ENST00000565453 C8orf48Q96LL4 319 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 TTLL2Q9BWV7 592 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 FAM126AQ9BYI3 521 aaPredicted RBP16.72■□□□□ 0.27
CDH3-204ENST00000565453 GOLPH3LQ9H4A5 285 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 DPEP3Q9H4B8 488 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 TMEM30AQ9NV96 361 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 ANAPC1Q9H1A4 1944 aa16.72■□□□□ 0.27
CDH3-204ENST00000565453 GVINP1Q7Z2Y8 2422 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 A0A1W2PQ27 194 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 A0A1W2PQ64 194 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 A0A1W2PQD8 194 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 RHOBTB3O94955 611 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 NR3C1P04150 777 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 PTPN1P18031 435 aaKnown RBP16.71■□□□□ 0.27
CDH3-204ENST00000565453 GRIK1P39086 918 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 USP46P62068 366 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 DLG4P78352 724 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 FAM160A1Q05DH4 1040 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 DPYDQ12882 1025 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 RUNX3Q13761 415 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 ZNF77Q15935 545 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 Q6ZS52 159 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 ATRIPQ8WXE1 791 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 CYP2S1Q96SQ9 504 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 EPC1Q9H2F5 836 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 EBF3Q9H4W6 596 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 NXF1Q9UBU9 619 aaKnown RBP16.71■□□□□ 0.27
CDH3-204ENST00000565453 TRAF3IP3Q9Y228 551 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 VPS13AQ96RL7 3174 aa16.71■□□□□ 0.27
CDH3-204ENST00000565453 TRAV19A0A0A6YYK7 116 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 C2orf78A6NCI8 922 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 TRIM66O15016 1216 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 PHACTR2O75167 634 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 PAPSS2O95340 614 aaPredicted RBP16.7■□□□□ 0.26
CDH3-204ENST00000565453 USP17L7P0C7H9 530 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 ARSAP15289 507 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 TCF3P15923 654 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 CXCL12P48061 93 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 CACNA2D1P54289 1103 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 NOP14P78316 857 aaKnown RBP16.7■□□□□ 0.26
CDH3-204ENST00000565453 BIRC3Q13489 604 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 MTF1Q14872 753 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 ZNF699Q32M78 642 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 C1orf220Q5T0J3 134 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 KRBA2Q6ZNG9 492 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 DENND5BQ6ZUT9 1274 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 ARL14EPQ8N8R7 260 aaPredicted RBP16.7■□□□□ 0.26
CDH3-204ENST00000565453 B3GALNT2Q8NCR0 500 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 TMC2Q8TDI7 906 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 RUBCNQ92622 972 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 ELMO3Q96BJ8 720 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 B3GNT5Q9BYG0 378 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 ZNF518BQ9C0D4 1074 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 SCAND2PQ9GZW5 306 aaPredicted RBP16.7■□□□□ 0.26
CDH3-204ENST00000565453 SDCBP2Q9H190 292 aa16.7■□□□□ 0.26
CDH3-204ENST00000565453 SMYD3Q9H7B4 428 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms