RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 CD58P19256 250 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 SLC1A1P43005 524 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 AARSP49588 968 aaKnown RBP eCLIP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 LILRA4P59901 499 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 GPS2Q13227 327 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 ZNF211Q13398 564 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 NNTQ13423 1086 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 WDR72Q3MJ13 1102 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 LIN9Q5TKA1 542 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 PASD1Q8IV76 773 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 TTC39CQ8N584 583 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 ZNF558Q96NG5 402 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 DDX47Q9H0S4 455 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 ACBD3Q9H3P7 528 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 CWH43Q9H720 699 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 GDAP2Q9NXN4 497 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 ADAM22Q9P0K1 906 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 HPCAL4Q9UM19 191 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 PCDHGC3Q9UN70 934 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 ZSCAN5CA6NGD5 496 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 MMP8P22894 467 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 CDH5P33151 784 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 PPM1AP35813 382 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 BCAR1P56945 870 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 ELAVL2Q12926 359 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 MAMLD1Q13495 774 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 PLEKHA7Q6IQ23 1121 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 CPNE8Q86YQ8 564 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 CASKIN2Q8WXE0 1202 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 C11orf70Q9BRQ4 267 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 ZNF518BQ9C0D4 1074 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 MRPL47Q9HD33 250 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 DNAJB4Q9UDY4 337 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 STK39Q9UEW8 545 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 NR2E1Q9Y466 385 aa13.38□□□□□ -0.27
NSMCE1-208ENST00000565070 GOLGA6L10A0A0M3HER8 536 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 ESYT3A0FGR9 886 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 H3BQF6 201 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 NRP1O14786 923 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 PPEF2O14830 753 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 GALTP07902 379 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 FAM163BP0C2L3 166 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 OAS2P29728 719 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 SLC11A1P49279 550 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 CARSP49589 748 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 GABPB1Q06547 395 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 DPH6Q7L8W6 267 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 MAATS1Q7Z4T9 603 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 SEC14L1Q92503 715 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 SDCBP2Q9H190 292 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 CYP3A43Q9HB55 503 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 PCDHA11Q9Y5I1 949 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 MRPL42Q9Y6G3 142 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 SCINQ9Y6U3 715 aa13.37□□□□□ -0.27
NSMCE1-208ENST00000565070 KIAA1671Q9BY89 1806 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 MYO1FO00160 1098 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 B4GALT3O60512 393 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 HUS1O60921 280 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 TADA2AO75478 443 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 PROSCO94903 275 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 PYGMP11217 842 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 RWDD2BP57060 319 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 CUL1Q13616 776 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 RAB30Q15771 203 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 C2CD6Q53TS8 623 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 LLGL2Q6P1M3 1020 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 KCNT2Q6UVM3 1135 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 DSTYKQ6XUX3 929 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SCARA5Q6ZMJ2 495 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 MMS22LQ6ZRQ5 1243 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SND1Q7KZF4 910 aaKnown RBP eCLIP13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 TOP6BLQ8N6T0 577 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 COLGALT1Q8NBJ5 622 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 TMEM35BQ8NCS4 154 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 APPL2Q8NEU8 664 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SPATA18Q8TC71 538 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 TFAP2BQ92481 460 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 CLP1Q92989 425 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 GDAP1L1Q96MZ0 367 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 TRIM7Q9C029 511 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 DNAI2Q9GZS0 605 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 MED4Q9NPJ6 270 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 AMACRQ9UHK6 382 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 ADAM28Q9UKQ2 775 aa13.36□□□□□ -0.27
NSMCE1-208ENST00000565070 DSEQ9UL01 958 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms