RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 A0A1W2PPM1 405 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 ADM5C9JUS6 153 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 CCNB1P14635 433 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 RPA3P35244 121 aaPredicted RBP16.01■□□□□ 0.15
HERC2-207ENST00000564734 CDH8P55286 799 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 OSTNP61366 133 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 TTLL12Q14166 644 aaPredicted RBP16.01■□□□□ 0.15
HERC2-207ENST00000564734 SPARCL1Q14515 664 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 HIF1AQ16665 826 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 HADHQ16836 314 aaKnown RBP16.01■□□□□ 0.15
HERC2-207ENST00000564734 ZC3H12AQ5D1E8 599 aaKnown RBP16.01■□□□□ 0.15
HERC2-207ENST00000564734 C1orf127Q8N9H9 656 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 DCPSQ96C86 337 aaKnown RBP16.01■□□□□ 0.15
HERC2-207ENST00000564734 TWNKQ96RR1 684 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 MAK16Q9BXY0 300 aaKnown RBP16.01■□□□□ 0.15
HERC2-207ENST00000564734 MINDY3Q9H8M7 445 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 SSU72Q9NP77 194 aaKnown RBP16.01■□□□□ 0.15
HERC2-207ENST00000564734 PSMC3IPQ9P2W1 217 aaPredicted RBP16.01■□□□□ 0.15
HERC2-207ENST00000564734 AGTPBP1Q9UPW5 1226 aa16.01■□□□□ 0.15
HERC2-207ENST00000564734 PAPPA2Q9BXP8 1791 aa16■□□□□ 0.15
HERC2-207ENST00000564734 IL18RAPO95256 599 aa16■□□□□ 0.15
HERC2-207ENST00000564734 IQCF3P0C7M6 154 aa16■□□□□ 0.15
HERC2-207ENST00000564734 CD19P15391 556 aa16■□□□□ 0.15
HERC2-207ENST00000564734 DYNLT1P63172 113 aa16■□□□□ 0.15
HERC2-207ENST00000564734 MYO1EQ12965 1108 aa16■□□□□ 0.15
HERC2-207ENST00000564734 MOGSQ13724 837 aa16■□□□□ 0.15
HERC2-207ENST00000564734 SLC1A5Q15758 541 aa16■□□□□ 0.15
HERC2-207ENST00000564734 PDK4Q16654 411 aa16■□□□□ 0.15
HERC2-207ENST00000564734 ANKMY2Q8IV38 441 aa16■□□□□ 0.15
HERC2-207ENST00000564734 SULF1Q8IWU6 871 aa16■□□□□ 0.15
HERC2-207ENST00000564734 TRAPPC12Q8WVT3 735 aa16■□□□□ 0.15
HERC2-207ENST00000564734 MCRS1Q96EZ8 462 aa16■□□□□ 0.15
HERC2-207ENST00000564734 SMC6Q96SB8 1091 aa16■□□□□ 0.15
HERC2-207ENST00000564734 GOLGA8MH3BSY2 632 aa16■□□□□ 0.15
HERC2-207ENST00000564734 IGF2BP3O00425 579 aaKnown RBP eCLIP16■□□□□ 0.15
HERC2-207ENST00000564734 CXCL8P10145 99 aa16■□□□□ 0.15
HERC2-207ENST00000564734 SLC8A1P32418 973 aa16■□□□□ 0.15
HERC2-207ENST00000564734 RDXP35241 583 aaKnown RBP16■□□□□ 0.15
HERC2-207ENST00000564734 GEMIN4P57678 1058 aaKnown RBP16■□□□□ 0.15
HERC2-207ENST00000564734 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
HERC2-207ENST00000564734 CAPN12Q6ZSI9 719 aa16■□□□□ 0.15
HERC2-207ENST00000564734 CDR2LQ86X02 465 aaPredicted RBP16■□□□□ 0.15
HERC2-207ENST00000564734 C4orf33Q8N1A6 199 aa16■□□□□ 0.15
HERC2-207ENST00000564734 EMC1Q8N766 993 aa16■□□□□ 0.15
HERC2-207ENST00000564734 MZB1Q8WU39 189 aa16■□□□□ 0.15
HERC2-207ENST00000564734 SPOCK2Q92563 424 aa16■□□□□ 0.15
HERC2-207ENST00000564734 ZNF668Q96K58 619 aaPredicted RBP16■□□□□ 0.15
HERC2-207ENST00000564734 ELOVL4Q9GZR5 314 aa16■□□□□ 0.15
HERC2-207ENST00000564734 METTL5Q9NRN9 209 aaKnown RBP16■□□□□ 0.15
HERC2-207ENST00000564734 GPR25O00155 361 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 NFICP08651 508 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 KRT15P19012 456 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 SKIV2L2P42285 1042 aaKnown RBP15.99■□□□□ 0.15
HERC2-207ENST00000564734 TFDP1Q14186 410 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 ZNF667Q5HYK9 610 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 CCDC62Q6P9F0 684 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 FAM47EQ6ZV65 393 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 UNC45BQ8IWX7 931 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 HMGXB4Q9UGU5 601 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 PHTF1Q9UMS5 762 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 MGAMO43451 1857 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 TCRBV7S3A2A0A539 114 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 IRF6O14896 467 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 ARL4CP56559 192 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 TAF5Q15542 800 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 ADGRD1Q6QNK2 874 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 ZBTB10Q96DT7 871 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 PAIP2Q9BPZ3 127 aaKnown RBP15.99■□□□□ 0.15
HERC2-207ENST00000564734 SMYD3Q9H7B4 428 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 RPF1Q9H9Y2 349 aaKnown RBP15.99■□□□□ 0.15
HERC2-207ENST00000564734 MCM8Q9UJA3 840 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 INO80B-WBP1J3KQ70 363 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 EDF1O60869 148 aaKnown RBP15.99■□□□□ 0.15
HERC2-207ENST00000564734 CILPO75339 1184 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 MICAL2O94851 1124 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 ENDOD1O94919 500 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 TRUB2O95900 331 aaKnown RBP15.99■□□□□ 0.15
HERC2-207ENST00000564734 DNAJC3Q13217 504 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 ORC1Q13415 861 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 ACAP1Q15027 740 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 EFTUD2Q15029 972 aaKnown RBP eCLIP15.99■□□□□ 0.151e-9■■■■□ 22.8
HERC2-207ENST00000564734 NLRP4Q96MN2 994 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 NFKBIZQ9BYH8 718 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 INO80BQ9C086 356 aaPredicted RBP15.99■□□□□ 0.15
HERC2-207ENST00000564734 BAIAP2L1Q9UHR4 511 aa15.99■□□□□ 0.15
HERC2-207ENST00000564734 LACTBL1A8MY62 500 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 MIPP30301 263 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 SSTR1P30872 391 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 PTPN11Q06124 597 aaPredicted RBP15.98■□□□□ 0.15
HERC2-207ENST00000564734 PNMA8AQ86V59 439 aaPredicted RBP15.98■□□□□ 0.15
HERC2-207ENST00000564734 KLHL29Q96CT2 875 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 VRTNQ9H8Y1 702 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 CYLDQ9NQC7 956 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 DNAJC25-GNG10A0A024R161 153 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 APOC4-APOC2K7ER74 178 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 TMEM63AO94886 807 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 APOC2P02655 101 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 PGK2P07205 417 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 KRT19P08727 400 aa15.98■□□□□ 0.15
HERC2-207ENST00000564734 KRT16P08779 473 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms