RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 GRIK1P39086 918 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 GPR15P49685 360 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 SATB1Q01826 763 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 TNK2Q07912 1038 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 NR1H3Q13133 447 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 TRPC3Q13507 836 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 PON2Q15165 354 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 FBXO43Q4G163 708 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 TMEM196Q5HYL7 178 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 LMBRD2Q68DH5 695 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 LAIR1Q6GTX8 287 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 SCN4BQ8IWT1 228 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 DCLK2Q8N568 766 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 SYAP1Q96A49 352 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 C8orf48Q96LL4 319 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 SMG9Q9H0W8 520 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 VRTNQ9H8Y1 702 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 PTPRJQ12913 1337 aa13.02□□□□□ -0.33
GTF3C1-204ENST00000564664 K7ESF4 209 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CLIC2O15247 247 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 FOXD2O60548 495 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 EXOC3O60645 756 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 ATP2C2O75185 946 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 RETP07949 1114 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 PDGFRBP09619 1106 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 HDCP19113 662 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 DRD1P21728 446 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CMA1P23946 247 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CYP2J2P51589 502 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CDR1P51861 262 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 TNNC1P63316 161 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 NOP14P78316 857 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CLDN10P78369 228 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 LMNB2Q03252 620 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CUL4BQ13620 913 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 WDR72Q3MJ13 1102 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 SDHAF4Q5VUM1 108 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 FOXD4L5Q5VV16 416 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 DENND5BQ6ZUT9 1274 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 NELFCDQ8IXH7 590 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 TTC8Q8TAM2 541 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 OSCP1Q8WVF1 389 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 FOXD4L4Q8WXT5 416 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 ATP2A3Q93084 1043 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CCDC127Q96BQ5 260 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 RMDN1Q96DB5 314 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 TTLL2Q9BWV7 592 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 BLZF1Q9H2G9 400 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 EBF3Q9H4W6 596 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 SLC39A2Q9NP94 309 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CRTAC1Q9NQ79 661 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 HPS4Q9NQG7 708 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 DUS2Q9NX74 493 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 DLL3Q9NYJ7 618 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 TRPM5Q9NZQ8 1165 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 GCNT4Q9P109 453 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 ARHGAP26Q9UNA1 814 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CCL26Q9Y258 94 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 FRYLO94915 3013 aa13.01□□□□□ -0.33
GTF3C1-204ENST00000564664 CEP250Q9BV73 2442 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 ZNF638Q14966 1978 aaKnown RBP13□□□□□ -0.33
GTF3C1-204ENST00000564664 CHURC1-FNTBB4DL54 471 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 PHACTR2O75167 634 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 TADA3O75528 432 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 KIF20AO95235 890 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 CKMP06732 381 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 PTPN1P18031 435 aaKnown RBP13□□□□□ -0.33
GTF3C1-204ENST00000564664 BDNFP23560 247 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 AFMP43652 599 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 CYP27A1Q02318 531 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 DNM1Q05193 864 aaKnown RBP13□□□□□ -0.33
GTF3C1-204ENST00000564664 KCNB1Q14721 858 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 MTF1Q14872 753 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 DGLUCYQ7Z3D6 616 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 CAMKK1Q8N5S9 505 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 OR6B3Q8NGW1 331 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 ZNF516Q92618 1163 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 MYLPFQ96A32 169 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 PAGE5Q96GU1 130 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 PCED1BQ96HM7 432 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 CYP2S1Q96SQ9 504 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 ELOVL4Q9GZR5 314 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 RBM12Q9NTZ6 932 aaKnown RBP13□□□□□ -0.33
GTF3C1-204ENST00000564664 DMAC2Q9NW81 257 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 CACNA1AO00555 2505 aa13□□□□□ -0.33
GTF3C1-204ENST00000564664 PDXKO00764 312 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 HRO43593 1189 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 RPN1P04843 607 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 P4HA1P13674 534 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 IFNAR2P48551 515 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 GALK1P51570 392 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 PSMC1P62191 440 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 SIM2Q14190 667 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 ZNF77Q15935 545 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 WDR44Q5JSH3 913 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 TDRD10Q5VZ19 366 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms