RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 UBALD2Q8IYN6 164 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 SLC44A3Q8N4M1 653 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 C12orf29Q8N999 325 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 SLC4A11Q8NBS3 891 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 FAM200AQ8TCP9 573 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 ING5Q8WYH8 240 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 FGF14Q92915 247 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 MCRS1Q96EZ8 462 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 NT5C1BQ96P26 610 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 TTLL2Q9BWV7 592 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 IL37Q9NZH6 218 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 NFE2L3Q9Y4A8 694 aa18.39■□□□□ 0.53
USB1-209ENST00000564387 A0A1W2PRU2 124 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 F8VP50 259 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 CD58P19256 250 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 ACO1P21399 889 aaKnown RBP18.38■□□□□ 0.53
USB1-209ENST00000564387 FCARP24071 287 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 EEF1GP26641 437 aaKnown RBP18.38■□□□□ 0.53
USB1-209ENST00000564387 GABRR2P28476 465 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 CDC25CP30307 473 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 GRIK1P39086 918 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 TYRO3Q06418 890 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 ORC1Q13415 861 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 MTMR3Q13615 1198 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 TEAD2Q15562 447 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 CAVIN1Q6NZI2 390 aaKnown RBP18.38■□□□□ 0.53
USB1-209ENST00000564387 PARM1Q6UWI2 310 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 MTSS1LQ765P7 747 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 SCN4BQ8IWT1 228 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 JAKMIP2Q96AA8 810 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 SMARCD1Q96GM5 515 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 ZSWIM3Q96MP5 696 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 ASB16Q96NS5 453 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 FUCA2Q9BTY2 467 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 UXTQ9UBK9 157 aaPredicted RBP18.38■□□□□ 0.53
USB1-209ENST00000564387 ZMYM5Q9UJ78 669 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 CNTN6Q9UQ52 1028 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 DENND4CQ5VZ89 1909 aa18.38■□□□□ 0.53
USB1-209ENST00000564387 TNFRSF10BO14763 440 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 ECI2O75521 394 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 TADA3O75528 432 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 CCDC130P13994 396 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 GJA1P17302 382 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 MTIF2P46199 727 aaKnown RBP18.37■□□□□ 0.53
USB1-209ENST00000564387 YWHAEP62258 255 aaKnown RBP18.37■□□□□ 0.53
USB1-209ENST00000564387 TCP11X2Q5H9J9 407 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 FAM78AQ5JUQ0 283 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 PHLDB3Q6NSJ2 640 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 DENND5BQ6ZUT9 1274 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 ZMIZ2Q8NF64 920 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 SLC2A14Q8TDB8 520 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 RSAD2Q8WXG1 361 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 CYFIP2Q96F07 1278 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 TMEM176AQ96HP8 235 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 TUBGCP2Q9BSJ2 902 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 RPP25Q9BUL9 199 aaKnown RBP18.37■□□□□ 0.53
USB1-209ENST00000564387 DNAI2Q9GZS0 605 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 INTS2Q9H0H0 1204 aaKnown RBP18.37■□□□□ 0.53
USB1-209ENST00000564387 NDST4Q9H3R1 872 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 C11orf16Q9NQ32 467 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 DUSP12Q9UNI6 340 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 NUMBLQ9Y6R0 609 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 ATP8B3O60423 1300 aa18.37■□□□□ 0.53
USB1-209ENST00000564387 FAM92AA1XBS5 289 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 KCNJ18B7U540 433 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 OBSL1O75147 1896 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 LETM1O95202 739 aaPredicted RBP18.36■□□□□ 0.53
USB1-209ENST00000564387 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
USB1-209ENST00000564387 ANXA13P27216 316 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 USP46P62068 366 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 LRMPQ12912 555 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 KCNJ12Q14500 433 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 NCAPHQ15003 741 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 TAF12Q16514 161 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 VWA3BQ502W6 1294 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 ARHGAP17Q68EM7 881 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 DPY19L2P1Q6NXN4 242 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 TRIM65Q6PJ69 517 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 ARHGEF19Q8IW93 802 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 STKLD1Q8NE28 680 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 SMARCD2Q92925 531 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 ELSPBP1Q96BH3 223 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 KCNK16Q96T55 309 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 SMOQ99835 787 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 BPIFA3Q9BQP9 254 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 ATXN3LQ9H3M9 355 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 TASP1Q9H6P5 420 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 PNPLA8Q9NP80 782 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 DMAP1Q9NPF5 467 aaPredicted RBP18.36■□□□□ 0.53
USB1-209ENST00000564387 EHD2Q9NZN4 543 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 GCNT4Q9P109 453 aa18.36■□□□□ 0.53
USB1-209ENST00000564387 GPR37L1O60883 481 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 AP1G2O75843 785 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 BEST1O76090 585 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 DDX6P26196 483 aaKnown RBP eCLIP18.35■□□□□ 0.53
USB1-209ENST00000564387 PON1P27169 355 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 MYL5Q02045 173 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 STXBP5Q5T5C0 1151 aa18.35■□□□□ 0.53
USB1-209ENST00000564387 PPP1R26Q5T8A7 1209 aaPredicted RBP18.35■□□□□ 0.53
USB1-209ENST00000564387 GBP6Q6ZN66 633 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms