RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PTPN13Q12923 2485 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 A0A0A0MRY4 1105 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 IGHV1OR15-9A0A0B4J2B8 117 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 J3QKU1 62 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 AP5Z1O43299 807 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 KLF8O95600 359 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 ADRB2P07550 413 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 SYPP08247 313 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 HARSP12081 509 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 ITPKBP27987 946 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 ABCG1P45844 678 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 IFNAR2P48551 515 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 GPR15P49685 360 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 PEX3P56589 373 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 RPL6Q02878 288 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 MAPK7Q13164 816 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 NOLC1Q14978 699 aaKnown RBP eCLIP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 HSF5Q4G112 596 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 SLC39A12Q504Y0 691 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 ZC2HC1CQ53FD0 456 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 EMC10Q5UCC4 262 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 ARMCX5Q6P1M9 558 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 RABEPKQ7Z6M1 372 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 DEFB119Q8N690 84 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 PIP4K2CQ8TBX8 421 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 SPPL2BQ8TCT7 592 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 C2orf15Q8WU43 125 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 MRPS31Q92665 395 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 ZNF274Q96GC6 653 aaPredicted RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 SENP8Q96LD8 212 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 CYP2S1Q96SQ9 504 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 LARP6Q9BRS8 491 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 PLEKHA5Q9HAU0 1116 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 CD248Q9HCU0 757 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 ZDHHC4Q9NPG8 344 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 UBQLN1Q9UMX0 589 aaKnown RBP8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 PCDHB9Q9Y5E1 797 aa8.36□□□□□ -1.07
HERPUD1-206ENST00000563343 CABIN1Q9Y6J0 2220 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 TCRBV21S2A2A0A5A6 115 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 CPLX1O14810 134 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 FAM189A1O60320 539 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 NEMFO60524 1076 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 NOL4O94818 638 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 CYP17A1P05093 508 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 ODC1P11926 461 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 GABRG2P18507 467 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 TNFSF9P41273 254 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 SLC6A11P48066 632 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 MCL1Q07820 350 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 SCRN1Q12765 414 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 GRIK2Q13002 908 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 NR1H3Q13133 447 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 BYSLQ13895 437 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 BMP2KLQ5H9B9 411 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 SPATA1Q5VX52 437 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 SLC36A4Q6YBV0 504 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 DBX2Q6ZNG2 339 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 C12orf40Q86WS4 652 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 PHTF2Q8N3S3 785 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 SH3RF2Q8TEC5 729 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 LRRC15Q8TF66 581 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 HMGB4Q8WW32 186 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 TRMT2BQ96GJ1 504 aaKnown RBP8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 MYRFLQ96LU7 910 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 TCHPQ9BT92 498 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 BHMT2Q9H2M3 363 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 TMLHEQ9NVH6 421 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 HCN2Q9UL51 889 aa8.35□□□□□ -1.07
HERPUD1-206ENST00000563343 SPTA1P02549 2419 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 PIEZO2Q9H5I5 2752 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 ANO9A1A5B4 782 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 C2orf78A6NCI8 922 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 CCDC169A6NNP5 214 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 LACTBL1A8MY62 500 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 PIRO00625 290 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 TOM1L1O75674 476 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 KAT7O95251 611 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 CTDNEP1O95476 244 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 NFATC1O95644 943 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 CKMP06732 381 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 USP17L7P0C7H9 530 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 ATXN1LP0C7T5 689 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 CSH1P0DML2 217 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 CSH2P0DML3 217 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 MUTP22033 750 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 STK3Q13188 491 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 SAFBQ15424 915 aaKnown RBP eCLIP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 TAF12Q16514 161 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 PLEKHG6Q3KR16 790 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 EOGTQ5NDL2 527 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 SDHAF4Q5VUM1 108 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 C9orf57Q5W0N0 161 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 RUFY3Q7L099 469 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 ARL14EPQ8N8R7 260 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 TRIML1Q8N9V2 468 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 ZNF419Q96HQ0 510 aaPredicted RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 HSPA12BQ96MM6 686 aa8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 YTHDC1Q96MU7 727 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 NTPCRQ9BSD7 190 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-206ENST00000563343 CD93Q9NPY3 652 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms