RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 NCAM2O15394 837 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 PDGFRBP09619 1106 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 CHRNB1P11230 501 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 CTHP32929 405 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 NCOA4Q13772 614 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 TAF12Q16514 161 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 TXNDC8Q6A555 127 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 TXNDC11Q6PKC3 985 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 MAB21L3Q8N8X9 362 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 NKD2Q969F2 451 aaPredicted RBP13.41□□□□□ -0.26
PKM-208ENST00000563275 CHFRQ96EP1 664 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 ZFYVE19Q96K21 471 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 IER2Q9BTL4 223 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 SEMA4AQ9H3S1 761 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 DPEP3Q9H4B8 488 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 SMYD3Q9H7B4 428 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 C8orf33Q9H7E9 229 aaPredicted RBP13.41□□□□□ -0.26
PKM-208ENST00000563275 KIF9Q9HAQ2 790 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 GCNT4Q9P109 453 aa13.41□□□□□ -0.26
PKM-208ENST00000563275 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
PKM-208ENST00000563275 UXTQ9UBK9 157 aaPredicted RBP13.41□□□□□ -0.26
PKM-208ENST00000563275 GPR179Q6PRD1 2367 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 WDR87Q6ZQQ6 2873 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 AKAP3O75969 853 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 KIF20AO95235 890 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 TCF3P15923 654 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 PTPN1P18031 435 aaKnown RBP13.4□□□□□ -0.26
PKM-208ENST00000563275 BDNFP23560 247 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 CCNE1P24864 410 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 CACNA2D1P54289 1103 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 USP46P62068 366 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 TNNC1P63316 161 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 NOP14P78316 857 aaKnown RBP13.4□□□□□ -0.26
PKM-208ENST00000563275 MTAPQ13126 283 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 TRPC3Q13507 836 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 GAS6Q14393 721 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 BECN1Q14457 450 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 SV2AQ7L0J3 742 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 RALGPS2Q86X27 583 aaPredicted RBP13.4□□□□□ -0.26
PKM-208ENST00000563275 YAF2Q8IY57 180 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 B3GALNT2Q8NCR0 500 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 OR6B3Q8NGW1 331 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 MRPS31Q92665 395 aaKnown RBP13.4□□□□□ -0.26
PKM-208ENST00000563275 C8orf48Q96LL4 319 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 SLC22A12Q96S37 553 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 SDCBP2Q9H190 292 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 SNX25Q9H3E2 840 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 HPS4Q9NQG7 708 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 TDP1Q9NUW8 608 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 SPATA6Q9NWH7 488 aaPredicted RBP13.4□□□□□ -0.26
PKM-208ENST00000563275 GTSE1Q9NYZ3 720 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 NXF1Q9UBU9 619 aaKnown RBP13.4□□□□□ -0.26
PKM-208ENST00000563275 MAGED2Q9UNF1 606 aaPredicted RBP13.4□□□□□ -0.26
PKM-208ENST00000563275 GREB1Q4ZG55 1949 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 OTOGLQ3ZCN5 2332 aa13.4□□□□□ -0.26
PKM-208ENST00000563275 ZNF292O60281 2723 aa13.4□□□□□ -0.27
PKM-208ENST00000563275 SPECC1L-ADORA2AF8WAN1 911 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 DPYSL4O14531 572 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 CALUO43852 315 aaPredicted RBP13.39□□□□□ -0.27
PKM-208ENST00000563275 LILRB5O75023 590 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 OLFM2O95897 454 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 ASS1P00966 412 aaKnown RBP13.39□□□□□ -0.27
PKM-208ENST00000563275 PFKLP17858 780 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 AVPR1AP37288 418 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 SOX9P48436 509 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 NUCB2P80303 420 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 TNK2Q07912 1038 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 USP4Q13107 963 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 COBLL1Q53SF7 1204 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 MDH1BQ5I0G3 518 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 PAQR9Q6ZVX9 377 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 SCN4BQ8IWT1 228 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 ZBTB44Q8NCP5 570 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 CSGALNACT1Q8TDX6 532 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 B3GNT5Q9BYG0 378 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 ZNF518BQ9C0D4 1074 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 NDRG2Q9UN36 371 aaKnown RBP13.39□□□□□ -0.27
PKM-208ENST00000563275 R4GN57 208 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 FRYLO94915 3013 aa13.39□□□□□ -0.27
PKM-208ENST00000563275 EP300Q09472 2414 aaPredicted RBP13.38□□□□□ -0.27
PKM-208ENST00000563275 OTOL1A6NHN0 477 aaPredicted RBP13.38□□□□□ -0.27
PKM-208ENST00000563275 F8VP50 259 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 TRIM66O15016 1216 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 LAMTOR5O43504 91 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 PHACTR2O75167 634 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 NR2F2P24468 414 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 ASPAP45381 313 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 VAMP7P51809 220 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 CDH8P55286 799 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 CYP27A1Q02318 531 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 PPP3CAQ08209 521 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 BIRC3Q13489 604 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 CCINQ13939 588 aa13.38□□□□□ -0.27
PKM-208ENST00000563275 ZNF77Q15935 545 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms