RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 SMYD3Q9H7B4 428 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 C8orf33Q9H7E9 229 aaPredicted RBP16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 TDP1Q9NUW8 608 aa16.28■□□□□ 0.2
LPCAT4-204ENST00000563240 CLDN5O00501 218 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 CALUO43852 315 aaPredicted RBP16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 LMNAP02545 664 aaKnown RBP16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 C4BPAP04003 597 aaKnown RBP16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 CHRNB1P11230 501 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 ATICP31939 592 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 CTHP32929 405 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 AP3M2P53677 418 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 USP46P62068 366 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 IFRD2Q12894 506 aaPredicted RBP16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 PON2Q15165 354 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 ZNF667Q5HYK9 610 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 CC2D1AQ6P1N0 951 aaPredicted RBP16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 ZC3H14Q6PJT7 736 aaKnown RBP16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 SLC9A9Q8IVB4 645 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 ARL14EPQ8N8R7 260 aaPredicted RBP16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 TRMT2BQ96GJ1 504 aaKnown RBP16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 ZNF518BQ9C0D4 1074 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 CHRDQ9H2X0 955 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 EBF3Q9H4W6 596 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 ZMYM5Q9UJ78 669 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 FBXO4Q9UKT5 387 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 FRMD4BQ9Y2L6 1034 aa16.27■□□□□ 0.2
LPCAT4-204ENST00000563240 CACNA1IQ9P0X4 2223 aa16.27■□□□□ 0.19
LPCAT4-204ENST00000563240 TICRRQ7Z2Z1 1910 aa16.27■□□□□ 0.19
LPCAT4-204ENST00000563240 MIA3Q5JRA6 1907 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 TRAV19A0A0A6YYK7 116 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 C2orf78A6NCI8 922 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 F8VP50 259 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 VNN1O95497 513 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 ABL1P00519 1130 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 CKMP06732 381 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 ARSAP15289 507 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 CACNA2D1P54289 1103 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 MLLT6P55198 1093 aaPredicted RBP16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 CLDN10P78369 228 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 PLCB2Q00722 1185 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 ITPRIPL2Q3MIP1 535 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 VSTM1Q6UX27 236 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 DENND5BQ6ZUT9 1274 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 RALGPS2Q86X27 583 aaPredicted RBP16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 ATRIPQ8WXE1 791 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 HINFPQ9BQA5 517 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 B3GNT5Q9BYG0 378 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 SDCBP2Q9H190 292 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 MMRN2Q9H8L6 949 aa16.26■□□□□ 0.19
LPCAT4-204ENST00000563240 F5P12259 2224 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 TRIM66O15016 1216 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 KIF20AO95235 890 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 STAU1O95793 577 aaKnown RBP16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 HDCP19113 662 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 NR2F2P24468 414 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 ORC1Q13415 861 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 RUNX3Q13761 415 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 GAS6Q14393 721 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 ZNF528Q3MIS6 628 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 WDR44Q5JSH3 913 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 SPOPLQ6IQ16 392 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 Q6ZS52 159 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 SV2AQ7L0J3 742 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 SMYD4Q8IYR2 804 aaPredicted RBP16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 B3GALNT2Q8NCR0 500 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 TMC2Q8TDI7 906 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 MSANTD3Q96H12 275 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 SPATA17Q96L03 361 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 FAM83CQ9BQN1 747 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 MED10Q9BTT4 135 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 SEMA4AQ9H3S1 761 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 HPS4Q9NQG7 708 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 TRAF3IP3Q9Y228 551 aa16.25■□□□□ 0.19
LPCAT4-204ENST00000563240 GOLGA6L4A6NEF3 574 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 OTOL1A6NHN0 477 aaPredicted RBP16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 KINO60870 393 aaKnown RBP16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 AKAP3O75969 853 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 USP17L7P0C7H9 530 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 TRIM49P0CI25 452 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 TRIM49CP0CI26 452 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 PIK3CAP42336 1068 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 VAMP7P51809 220 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 SATB1Q01826 763 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 FAM160A1Q05DH4 1040 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 PNOCQ13519 176 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 LRRC32Q14392 662 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 KCNB1Q14721 858 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 SGSM1Q2NKQ1 1148 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 ZACNQ401N2 412 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 C1orf220Q5T0J3 134 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 EEF2KMTQ96G04 330 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 C8orf48Q96LL4 319 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 KIF9Q9HAQ2 790 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 TMEM30AQ9NV96 361 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 ZSCAN32Q9NX65 697 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 TRPM5Q9NZQ8 1165 aa16.24■□□□□ 0.19
LPCAT4-204ENST00000563240 WNT6Q9Y6F9 365 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms