RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 FAM35AQ86V20 835 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 ARHGEF19Q8IW93 802 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 SCN4BQ8IWT1 228 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 SLC4A11Q8NBS3 891 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 LEMD2Q8NC56 503 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 CCDC150Q8NCX0 1101 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 ZMIZ2Q8NF64 920 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 FAM200AQ8TCP9 573 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 FGF14Q92915 247 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 TNIP3Q96KP6 325 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 SPATA17Q96L03 361 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 C8orf48Q96LL4 319 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 MYRFLQ96LU7 910 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 KCNK16Q96T55 309 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 FUCA2Q9BTY2 467 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 HSD3B7Q9H2F3 369 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 CISHQ9NSE2 258 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 GDE1Q9NZC3 331 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 DACH1Q9UI36 760 aa9.09□□□□□ -0.95
UBR1-204ENST00000563239 ZFP37Q9Y6Q3 630 aaPredicted RBP9.09□□□□□ -0.95
UBR1-204ENST00000563239 NCANO14594 1321 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 RNF225M0QZC1 329 aaPredicted RBP9.08□□□□□ -0.96
UBR1-204ENST00000563239 TNFRSF10BO14763 440 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 BEST1O76090 585 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 CLSTN1O94985 981 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 SLC9A1P19634 815 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 GABRR2P28476 465 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 GRIK1P39086 918 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 APBA1Q02410 837 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 VEPH1Q14D04 833 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 STX1AQ16623 288 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 ZNF394Q53GI3 561 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 FAM78AQ5JUQ0 283 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 TANGO2Q6ICL3 276 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 SASS6Q6UVJ0 657 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 RRAGAQ7L523 313 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 SLC44A3Q8N4M1 653 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 SLC2A14Q8TDB8 520 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 EDAQ92838 391 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 RSPRY1Q96DX4 576 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 TRMT2BQ96GJ1 504 aaKnown RBP9.08□□□□□ -0.96
UBR1-204ENST00000563239 CEP295NLQ96MC4 621 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 KREMEN1Q96MU8 473 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 ASB16Q96NS5 453 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 HNRNPABQ99729 332 aaKnown RBP9.08□□□□□ -0.96
UBR1-204ENST00000563239 SMOQ99835 787 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 TTLL2Q9BWV7 592 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 NT5C1AQ9BXI3 368 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 PLA2G2FQ9BZM2 168 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 INTS2Q9H0H0 1204 aaKnown RBP9.08□□□□□ -0.96
UBR1-204ENST00000563239 FAM124BQ9H5Z6 455 aaPredicted RBP9.08□□□□□ -0.96
UBR1-204ENST00000563239 CSNK1G1Q9HCP0 422 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 FAM49BQ9NUQ9 324 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 ANO10Q9NW15 660 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 IL37Q9NZH6 218 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 IGSF9Q9P2J2 1179 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 NFE2L3Q9Y4A8 694 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 NUMBLQ9Y6R0 609 aa9.08□□□□□ -0.96
UBR1-204ENST00000563239 GREB1Q4ZG55 1949 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 KCNJ18B7U540 433 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 HHLA1C9JL84 531 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TRIM66O15016 1216 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 NARSO43776 548 aaKnown RBP9.07□□□□□ -0.96
UBR1-204ENST00000563239 AP1G2O75843 785 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 CSH1P0DML2 217 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 CSH2P0DML3 217 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 ALADP13716 330 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 MTIF2P46199 727 aaKnown RBP9.07□□□□□ -0.96
UBR1-204ENST00000563239 ZNF132P52740 706 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 CYP4F8P98187 520 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 GCNT1Q02742 428 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TDGQ13569 410 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 KCNJ12Q14500 433 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 MAN2A1Q16706 1144 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TPD52L1Q16890 204 aaPredicted RBP9.07□□□□□ -0.96
UBR1-204ENST00000563239 VWA3BQ502W6 1294 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TCP11X2Q5H9J9 407 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 PPP1R26Q5T8A7 1209 aaPredicted RBP9.07□□□□□ -0.96
UBR1-204ENST00000563239 GJB7Q6PEY0 223 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TRIM65Q6PJ69 517 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 CREBRFQ8IUR6 639 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TTC39CQ8N584 583 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 NXPE3Q969Y0 559 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 CYFIP2Q96F07 1278 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 ASIC4Q96FT7 647 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TMEM176AQ96HP8 235 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 NT5C1BQ96P26 610 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 LRRC3BQ96PB8 259 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 KXD1Q9BQD3 176 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 ZSWIM1Q9BR11 485 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TUBGCP2Q9BSJ2 902 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 CRACR2AQ9BSW2 395 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 SLC46A2Q9BY10 475 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 ATXN3LQ9H3M9 355 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 NDST4Q9H3R1 872 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 TRPV4Q9HBA0 871 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 SIX2Q9NPC8 291 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 FANCLQ9NW38 375 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 GCNT4Q9P109 453 aa9.07□□□□□ -0.96
UBR1-204ENST00000563239 AJAP1Q9UKB5 411 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms