RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 KIAA0391O15091 583 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 CEACAM1P13688 526 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 HDCP19113 662 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 CSRP1P21291 193 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 PPP3CCP48454 512 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 MYO1EQ12965 1108 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 HSF5Q4G112 596 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 SDHAF4Q5VUM1 108 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 ADGRF2Q8IZF7 708 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 SH3RF2Q8TEC5 729 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 EZH1Q92800 747 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 TMX3Q96JJ7 454 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 CNOT6LQ96LI5 555 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 TMEM9BQ9NQ34 198 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 SNX9Q9Y5X1 595 aa16.88■□□□□ 0.29
HERPUD1-205ENST00000562914 TMEM8BA6NDV4 472 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 C4orf47A7E2U8 309 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 DCLK1O15075 740 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 ALDH1A2O94788 518 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 DPP6P42658 865 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 MRPS21P82921 87 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 SF3A1Q15459 793 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 TCEAL6Q6IPX3 200 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 FAM171BQ6P995 826 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 ARL14EPQ8N8R7 260 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 CXorf38Q8TB03 319 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 USP33Q8TEY7 942 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 TCEAL3Q969E4 200 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 SLC22A12Q96S37 553 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 MAGEC2Q9UBF1 373 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 MMP17Q9ULZ9 603 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 SMC3Q9UQE7 1217 aa16.87■□□□□ 0.29
HERPUD1-205ENST00000562914 SLC9A3R1O14745 358 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 KRT19P08727 400 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 TMEM191BP0C7N4 346 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 ACAT1P24752 427 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 TXLNAP40222 546 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 EIF2DP41214 584 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 NAIF1Q69YI7 327 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 UNQ6494/PRO21346Q6UXR6 183 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 DYMQ7RTS9 669 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 CYP2U1Q7Z449 544 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 SCN4BQ8IWT1 228 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 SYCP3Q8IZU3 236 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 STKLD1Q8NE28 680 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 ANKRD36BP1Q96IX9 119 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 POLR3BQ9NW08 1133 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 TRPM5Q9NZQ8 1165 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 EVLQ9UI08 416 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 SDK1Q7Z5N4 2213 aa16.86■□□□□ 0.29
HERPUD1-205ENST00000562914 KIAA1549LQ6ZVL6 1849 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 C2orf78A6NCI8 922 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 MYMKA6NI61 221 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 GCNT3O95395 438 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 ANXA13P27216 316 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 GRIN1Q05586 938 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 ZNF252P-AS1Q0IIN9 211 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 LMAN2Q12907 356 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 BYSLQ13895 437 aaKnown RBP16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 SURF1Q15526 300 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 CRY1Q16526 586 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 SOWAHAQ2M3V2 549 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 SPDYCQ5MJ68 293 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 KDF1Q8NAX2 398 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 TTC16Q8NEE8 873 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 SAAL1Q96ER3 474 aa16.85■□□□□ 0.29
HERPUD1-205ENST00000562914 CFAP47Q6ZTR5 3102 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 K7EQS6 105 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 TRIM66O15016 1216 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 OPRD1P41143 372 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 WNT7BP56706 349 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 SLC7A9P82251 487 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 KCNA1Q09470 495 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 C2orf27AQ580R0 203 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 SH3PXD2AQ5TCZ1 1133 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 RRAGBQ5VZM2 374 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 ANO7Q6IWH7 933 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 LIMS2Q7Z4I7 341 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 OSTM1Q86WC4 334 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 DDX42Q86XP3 938 aaKnown RBP eCLIP16.84■□□□□ 0.292e-8■■■■■ 39.1
HERPUD1-205ENST00000562914 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 DNAJC19Q96DA6 116 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 SPACA7Q96KW9 195 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 TTLL2Q9BWV7 592 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 TPSD1Q9BZJ3 242 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 IKZF4Q9H2S9 585 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 LINC00597Q9H2U6 94 aa16.84■□□□□ 0.29
HERPUD1-205ENST00000562914 LEFTY2O00292 366 aa16.83■□□□□ 0.28
HERPUD1-205ENST00000562914 TNNC2P02585 160 aa16.83■□□□□ 0.28
HERPUD1-205ENST00000562914 FAM163BP0C2L3 166 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms