RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PRAMEF19Q5SWL8 479 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 SLC13A5Q86YT5 568 aaPredicted RBP7.9□□□□□ -1.15
TCF4-216ENST00000562680 ATP11CQ8NB49 1132 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 GLIS3Q8NEA6 775 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 MRRFQ96E11 262 aaKnown RBP7.9□□□□□ -1.15
TCF4-216ENST00000562680 IRX2Q9BZI1 471 aaPredicted RBP7.9□□□□□ -1.15
TCF4-216ENST00000562680 METTL5Q9NRN9 209 aaKnown RBP7.9□□□□□ -1.15
TCF4-216ENST00000562680 PAK5Q9P286 719 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 LY75O60449 1722 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 CACNA1SQ13698 1873 aa7.9□□□□□ -1.15
TCF4-216ENST00000562680 PRRG1O14668 218 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SPAG6O75602 509 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SMPD1P17405 629 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 STIP1P31948 543 aaKnown RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 NNMTP40261 264 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 IL9RQ01113 521 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 CNGA2Q16280 664 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 EPC2Q52LR7 807 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ARHGEF19Q8IW93 802 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 KIAA0319LQ8IZA0 1049 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 PPFIBP2Q8ND30 876 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ACTRT1Q8TDG2 376 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ARHGEF26Q96DR7 871 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 HSFY1Q96LI6 401 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 PIDD1Q9HB75 910 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SLX4Q8IY92 1834 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 KRT38O76015 456 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ERBB2P04626 1255 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SLC10A3P09131 477 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ARHGAP1Q07960 439 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 GRIK3Q13003 919 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 CTXN3Q4LDR2 81 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 RNF219Q5W0B1 726 aaPredicted RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 NUDT18Q6ZVK8 323 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 IRF2BP1Q8IU81 584 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ATP6V0D2Q8N8Y2 350 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 PPP4R1Q8TF05 950 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ADAM2Q99965 735 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 YIPF3Q9GZM5 350 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 FBXO44Q9H4M3 255 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 VIPAS39Q9H9C1 493 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SP110Q9HB58 689 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 XPNPEP1Q9NQW7 623 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 TMEM39AQ9NV64 488 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 RABL2BQ9UNT1 228 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 TNRC6CQ9HCJ0 1690 aaKnown RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 ADCY6O43306 1168 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 CRCPO75575 148 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 EDNRBP24530 442 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 NDST1P52848 882 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 YWHAHQ04917 246 aaPredicted RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 MGAT5BQ3V5L5 792 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 EFHBQ8N7U6 833 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 UBA3Q8TBC4 463 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 EPS8L1Q8TE68 723 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ZBTB10Q96DT7 871 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SMARCD1Q96GM5 515 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 DDX20Q9UHI6 824 aaKnown RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 ATP11BQ9Y2G3 1177 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 UBR3Q6ZT12 1888 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 RPSAP08865 295 aaKnown RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 ARF4P18085 180 aaPredicted RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 EPHB1P54762 984 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 CRHR2Q13324 411 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 PLD1Q13393 1074 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 ITGA7Q13683 1181 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 IKBKEQ14164 716 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 FBXO38Q6PIJ6 1188 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SLC47A2Q86VL8 602 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 B4GALNT2Q8NHY0 566 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 BAP1Q92560 729 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 APBB2Q92870 758 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 VPS39Q96JC1 886 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 NFKBIZQ9BYH8 718 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 TSPYL2Q9H2G4 693 aaPredicted RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 KIF9Q9HAQ2 790 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.89□□□□□ -1.15
TCF4-216ENST00000562680 PACSIN2Q9UNF0 486 aaPredicted RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 PCDHB5Q9Y5E4 795 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 RREB1Q92766 1687 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 EEF2KO00418 725 aaKnown RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 DDX3XO00571 662 aaKnown RBP eCLIP7.89□□□□□ -1.15
TCF4-216ENST00000562680 UPP2O95045 317 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 MT-ND3P03897 115 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 CYP3A5P20815 502 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 RRM1P23921 792 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 CREMQ03060 361 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 IZUMO3Q5VZ72 239 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 TRMT10CQ7L0Y3 403 aaKnown RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 ZNF512Q96ME7 567 aaPredicted RBP7.89□□□□□ -1.15
TCF4-216ENST00000562680 GBP5Q96PP8 586 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SAYSD1Q9NPB0 183 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SENP1Q9P0U3 644 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 SRRDQ9UH36 339 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 PCDHB12Q9Y5F1 795 aa7.89□□□□□ -1.15
TCF4-216ENST00000562680 POC1B-GALNT4F8VUJ3 575 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 OPLAHO14841 1288 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 CAPN15O75808 1086 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 ATG7O95352 703 aa7.88□□□□□ -1.15
TCF4-216ENST00000562680 C22orf31O95567 290 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms