RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 RDM1Q8NG50 284 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 SKA1Q96BD8 255 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 FAM136AQ96C01 138 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 WDR83Q9BRX9 315 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 IQCGQ9H095 443 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 KCNK13Q9HB14 408 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 CYP26B1Q9NR63 512 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 ARMCX1Q9P291 453 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 LRRIQ4A6NIV6 560 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 MAP3K13O43283 966 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 ASNSP08243 561 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 PSMA2P25787 234 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 PGM1P36871 562 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 PRKCEQ02156 737 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 DGKZQ13574 1117 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 THOC5Q13769 683 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 RNF220Q5VTB9 566 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 CIAPIN1Q6FI81 312 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 TMEM143Q96AN5 459 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 SIGLEC16A6NMB1 481 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 YDJCA8MPS7 323 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 FCHO1O14526 889 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 MAP3K7O43318 606 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 DNAJC6O75061 913 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 STAM2O75886 525 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 TMEM63AO94886 807 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 PSAPP07602 524 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 PYGBP11216 843 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 OCRLQ01968 901 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 SYCP2LQ5T4T6 812 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 GPAT2Q6NUI2 795 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 ARHGAP24Q8N264 748 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 TTC13Q8NBP0 860 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 OXNAD1Q96HP4 312 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 SERAC1Q96JX3 654 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 CGRRF1Q99675 332 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 TARS2Q9BW92 718 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 HAPLN2Q9GZV7 340 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 CNTN6Q9UQ52 1028 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 TELO2Q9Y4R8 837 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 FAM237BA0A1B0GVD1 139 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 H0YIN7 160 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 K7ERI5 159 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 DLDP09622 509 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 RXRBP28702 533 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 RTP1P59025 263 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 YWHAGP61981 247 aaKnown RBP eCLIP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 TAP1Q03518 808 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 FAAP100Q0VG06 881 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 PRKD1Q15139 912 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 RBBP5Q15291 538 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 SCARA3Q6AZY7 606 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 UNC45BQ8IWX7 931 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 FAM71DQ8N9W8 422 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 DEPTORQ8TB45 409 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 APOPT1Q96IL0 206 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 FAM161BQ96MY7 647 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 PIDD1Q9HB75 910 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 C2CD2Q9Y426 696 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 CNTNAP1P78357 1384 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 GOLGB1Q14789 3259 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 TGDSO95455 350 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 KCNA3P22001 575 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 ELK3P41970 407 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 ZNF200P98182 395 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 RFX6Q8HWS3 928 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 SLC38A10Q9HBR0 1119 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 PDLIM7Q9NR12 457 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 MAP3K20Q9NYL2 800 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 STX18Q9P2W9 335 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 SLC9A2Q9UBY0 812 aa14.62□□□□□ -0.07
VPS9D1-202ENST00000561976 MYH9P35579 1960 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 B2RBV5 119 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 E7ESA3 106 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 WDR46O15213 610 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 STBD1O95210 358 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 LDHAP00338 332 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 ERFP50548 548 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 GHRHRQ02643 423 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 AP1B1Q10567 949 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 BIRC2Q13490 618 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 KRT72Q14CN4 511 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 HADHQ16836 314 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 KBTBD12Q3ZCT8 623 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 SLFN12LQ6IEE8 588 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 ALYREFQ86V81 257 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 CHSY1Q86X52 802 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 CCDC60Q8IWA6 550 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 CFAP61Q8NHU2 1237 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 PHACTR1Q9C0D0 580 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 NMUR2Q9GZQ4 415 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 TCRBV5S1A1TA0A578 114 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 RAD17O75943 681 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 LSM8O95777 96 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 CST3P01034 146 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 ENO1P06733 434 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 CCND2P30279 289 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 ABCD1P33897 745 aa14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 RFC1P35251 1148 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-202ENST00000561976 EIF3EP60228 445 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms