RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 PRUNE1Q86TP1 453 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 EPS8L3Q8TE67 593 aaKnown RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 C18orf25Q96B23 403 aaPredicted RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 HAUS1Q96CS2 278 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 ROPN1BQ9BZX4 212 aaPredicted RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 AP5M1Q9H0R1 490 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 CNOT10Q9H9A5 744 aaKnown RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 ROPN1Q9HAT0 212 aaPredicted RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 E5RJQ4 531 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 DNALI1O14645 258 aaPredicted RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 RASGRF2O14827 1237 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 TREHO43280 583 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 RNF8O76064 485 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 ACSL3O95573 720 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 TTC4O95801 387 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 AGTP01019 485 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 ITGAVP06756 1048 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 CYP2B6P20813 491 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 GPD1P21695 349 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 MIPP30301 263 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 RGS2P41220 211 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 CCT5P48643 541 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 ZNF157P51786 506 aaPredicted RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 ZNF143P52747 638 aaPredicted RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 KCNT1Q5JUK3 1230 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 GLRA4Q5JXX5 417 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 OR6B2Q6IFH4 312 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 FAM183BPQ6ZVS7 135 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 C12orf29Q8N999 325 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 GLIS1Q8NBF1 620 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 SLC35B2Q8TB61 432 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 TMEM40Q8WWA1 233 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 APOL6Q9BWW8 343 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 FRMD8P1Q9BZ68 369 aaPredicted RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 FOXP3Q9BZS1 431 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 DNAJC17Q9NVM6 304 aaKnown RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 ASNSD1Q9NWL6 643 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 UBQLN1Q9UMX0 589 aaKnown RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 PIN4Q9Y237 131 aaKnown RBP10.31□□□□□ -0.76
SMG1-205ENST00000561947 Q9Y3F1 56 aa10.31□□□□□ -0.76
SMG1-205ENST00000561947 TRUB2O95900 331 aaKnown RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 SETSIPP0DME0 302 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 PCK1P35558 622 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 CDR1P51861 262 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 BEX3Q00994 111 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 PKDCCQ504Y2 493 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 TNFAIP8L3Q5GJ75 292 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 PPP1R26Q5T8A7 1209 aaPredicted RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 C9orf57Q5W0N0 161 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 MFSD5Q6N075 450 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 C17orf99Q6UX52 265 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 CEP128Q6ZU80 1094 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 BBS12Q6ZW61 710 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 ACOT1Q86TX2 421 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 RELL1Q8IUW5 271 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 CMASQ8NFW8 434 aaPredicted RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 APBA2Q99767 749 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 CNPY3Q9BT09 278 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 KATNAL1Q9BW62 490 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 STMN4Q9H169 189 aaPredicted RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 NINJ2Q9NZG7 142 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 PCSK1NQ9UHG2 260 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 NME7Q9Y5B8 376 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 C2CD4BA6NLJ0 364 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 NDUFAB1O14561 156 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 AKAP5P24588 427 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 ARSEP51690 589 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 ZNF200P98182 395 aaPredicted RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 AUHQ13825 339 aaKnown RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 UNC93AQ86WB7 457 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 TTC30AQ86WT1 665 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 ZCCHC9Q8N567 271 aaKnown RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 TTC13Q8NBP0 860 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 PWWP2AQ96N64 755 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 ADAM7Q9H2U9 754 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 GJD2Q9UKL4 321 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 USP18Q9UMW8 372 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 C17orf102A2RUQ5 167 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 PIK3R2O00459 728 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 PIRO00625 290 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 CST8O60676 142 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 CD4P01730 458 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 IGHA2P01877 340 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 CD48P09326 243 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 ZSCAN5DPP0CG00 497 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 MMP13P45452 471 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 SLCO1A2P46721 670 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 RGS7P49802 495 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 DYNLT1P63172 113 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 IFI35P80217 286 aaPredicted RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 KYNUQ16719 465 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 UBXN11Q5T124 520 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 TRNP1Q6NT89 227 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 NLRP14Q86W24 1093 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 KCTD6Q8NC69 237 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 RXFP2Q8WXD0 754 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 SOCS4Q8WXH5 440 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 PIWIL1Q96J94 861 aaKnown RBP10.3□□□□□ -0.76
SMG1-205ENST00000561947 TSPAN18Q96SJ8 248 aa10.3□□□□□ -0.76
SMG1-205ENST00000561947 SLC4A5Q9BY07 1137 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms