RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 EIF2B2P49770 351 aaKnown RBP19.47■□□□□ 0.71
RAB40C-206ENST00000561781 ERFP50548 548 aa19.47■□□□□ 0.71
RAB40C-206ENST00000561781 CDK9P50750 372 aaKnown RBP19.47■□□□□ 0.71
RAB40C-206ENST00000561781 OVGP1Q12889 678 aa19.47■□□□□ 0.71
RAB40C-206ENST00000561781 APOFQ13790 326 aa19.47■□□□□ 0.71
RAB40C-206ENST00000561781 TRIP13Q15645 432 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-206ENST00000561781 C6orf183Q5T699 404 aa19.47■□□□□ 0.71
RAB40C-206ENST00000561781 DDHD1Q8NEL9 900 aa19.47■□□□□ 0.71
RAB40C-206ENST00000561781 AGBL3Q8NEM8 1001 aa19.47■□□□□ 0.71
RAB40C-206ENST00000561781 PRR11Q96HE9 360 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-206ENST00000561781 OXNAD1Q96HP4 312 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-206ENST00000561781 DAGLAQ9Y4D2 1042 aa19.47■□□□□ 0.71
RAB40C-206ENST00000561781 TIMM22Q9Y584 194 aa19.47■□□□□ 0.71
RAB40C-206ENST00000561781 EXOC1LA0A1B0GW35 172 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 IVDP26440 423 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 PIK3CAP42336 1068 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 DRAP1Q14919 205 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-206ENST00000561781 RASA2Q15283 850 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 METTL21CQ5VZV1 264 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 TMEM214Q6NUQ4 689 aaKnown RBP19.46■□□□□ 0.71
RAB40C-206ENST00000561781 C1orf54Q8WWF1 131 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 GJA10Q969M2 543 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 PRMT6Q96LA8 375 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-206ENST00000561781 C9orf72Q96LT7 481 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 KIAA1586Q9HCI6 787 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 MYOZ2Q9NPC6 264 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 CHORDC1Q9UHD1 332 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-206ENST00000561781 ADAMTS6Q9UKP5 1117 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 SOBPA7XYQ1 873 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 TYROBPO43914 113 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 BAIAP3O94812 1187 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 TNFAIP3P21580 790 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 CPA2P48052 419 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 HADHBP55084 474 aaKnown RBP19.46■□□□□ 0.71
RAB40C-206ENST00000561781 MESDQ14696 234 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 DLGAP5Q15398 846 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 TLR1Q15399 786 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 DCDC5Q6ZRR9 648 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 GPBP1Q86WP2 473 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 C4orf33Q8N1A6 199 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 ANKRD36BP1Q96IX9 119 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 NSMCE3Q96MG7 304 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 SSU72Q9NP77 194 aaKnown RBP19.46■□□□□ 0.71
RAB40C-206ENST00000561781 CARD8Q9Y2G2 431 aa19.46■□□□□ 0.71
RAB40C-206ENST00000561781 LAMB1P07942 1786 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 A0A088AWK7 358 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 KLRF2D3W0D1 207 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 CASQ2O14958 399 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-206ENST00000561781 ITM2AO43736 263 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 EDIL3O43854 480 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 MGEA5O60502 916 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 SORBS3O60504 671 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 CSDE1O75534 798 aaKnown RBP19.45■□□□□ 0.7
RAB40C-206ENST00000561781 CDH3P22223 829 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 STT3AP46977 705 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 CASP4P49662 377 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 SNAPC2Q13487 334 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 TRIP10Q15642 601 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 NDUFA5Q16718 116 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 NIPAL1Q6NVV3 410 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 JADE3Q92613 823 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 CLPTM1LQ96KA5 538 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 GPATCH1Q9BRR8 931 aaKnown RBP19.45■□□□□ 0.7
RAB40C-206ENST00000561781 ANAPC5Q9UJX4 755 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 RSPH10B2B2RC85 870 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 CNOT3O75175 753 aaKnown RBP19.45■□□□□ 0.7
RAB40C-206ENST00000561781 RSPH10BP0C881 870 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 SEPT7Q16181 437 aaKnown RBP19.45■□□□□ 0.7
RAB40C-206ENST00000561781 EFHC1Q5JVL4 640 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 RWDD4Q6NW29 188 aaKnown RBP19.45■□□□□ 0.7
RAB40C-206ENST00000561781 PYDC1Q8WXC3 89 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 EME1Q96AY2 570 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 EFHD2Q96C19 240 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-206ENST00000561781 CFAP57Q96MR6 1250 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 C1orf21Q9H246 121 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 KCNK13Q9HB14 408 aa19.45■□□□□ 0.7
RAB40C-206ENST00000561781 WNT10BO00744 389 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 KDM1AO60341 852 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 ZBED4O75132 1171 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 PLA2G4BP0C869 781 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 SPTY2D1Q68D10 685 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-206ENST00000561781 ELMSAN1Q6PJG2 1045 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 CPNE8Q86YQ8 564 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 BORCS5Q969J3 196 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 SGF29Q96ES7 293 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 SH3GL1Q99961 368 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 TSSK1BQ9BXA7 367 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 GPR88Q9GZN0 384 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 TDRD3Q9H7E2 651 aaKnown RBP19.44■□□□□ 0.7
RAB40C-206ENST00000561781 DNAJC12Q9UKB3 198 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 RAB26Q9ULW5 256 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 MYO3BQ8WXR4 1341 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 GSTTP1A0A1W2PQM5 241 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 TKTP29401 623 aaKnown RBP19.44■□□□□ 0.7
RAB40C-206ENST00000561781 HOXD13P35453 343 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 CREB5Q02930 508 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 KNOP1Q1ED39 458 aaKnown RBP19.44■□□□□ 0.7
RAB40C-206ENST00000561781 APOBEC3HQ6NTF7 200 aaKnown RBP19.44■□□□□ 0.7
RAB40C-206ENST00000561781 SLC25A41Q8N5S1 370 aa19.44■□□□□ 0.7
RAB40C-206ENST00000561781 PPP4R1Q8TF05 950 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms