RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CGRRF1Q99675 332 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 ACBD6Q9BR61 282 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 SRRTQ9BXP5 876 aaKnown RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 XYLT2Q9H1B5 865 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 CHRDQ9H2X0 955 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 KCTD10Q9H3F6 313 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 ZFP14Q9HCL3 533 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 TMLHEQ9NVH6 421 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 FAM13BQ9NYF5 915 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 TFIP11Q9UBB9 837 aaKnown RBP7.38□□□□□ -1.23
SPG11-224ENST00000561268 VPS9D1Q9Y2B5 631 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 SIT1Q9Y3P8 196 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 NME7Q9Y5B8 376 aa7.38□□□□□ -1.23
SPG11-224ENST00000561268 PI4KAP42356 2102 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 A0A1W2PRU2 124 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 GOLGA8IPA6NC78 632 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 ZNF233A6NK53 670 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 GOLGA8JA6NMD2 632 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 TULP1O00294 542 aaPredicted RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 CHADO15335 359 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 GFRA3O60609 400 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 TACC1O75410 805 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 SOAT2O75908 522 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 PAPSS2O95340 614 aaPredicted RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 PRAMEF12O95522 483 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 F11P03951 625 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 FAM163BP0C2L3 166 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 TMEM191BP0C7N4 346 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 TCF3P15923 654 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 GJA1P17302 382 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 WARSP23381 471 aaKnown RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 CASP1P29466 404 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 CDC25CP30307 473 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 MAGEA11P43364 429 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 ALDH1A3P47895 512 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 NLRP12P59046 1061 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 TFAMQ00059 246 aaKnown RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 USP4Q13107 963 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 CUL4BQ13620 913 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 ZNF268Q14587 947 aaPredicted RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 SNRNP35Q16560 246 aaKnown RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 NFIL3Q16649 462 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 CCDC142Q17RM4 750 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 SOWAHAQ2M3V2 549 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 SLC39A12Q504Y0 691 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 SLC44A4Q53GD3 710 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 CYP4A22Q5TCH4 519 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 FAM171BQ6P995 826 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 C1orf228Q6PIY5 440 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 THSD4Q6ZMP0 1018 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 TPRG1Q6ZUI0 275 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 DNAJB7Q7Z6W7 309 aaPredicted RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 C1orf210Q8IVY1 113 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 DHX40Q8IX18 779 aaKnown RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 PLPP6Q8IY26 295 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 ADGRF2Q8IZF7 708 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 SYCP3Q8IZU3 236 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 TRIML1Q8N9V2 468 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 ZBTB44Q8NCP5 570 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 PLEKHO2Q8TD55 490 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 CACTINQ8WUQ7 758 aaKnown RBP7.37□□□□□ -1.23
SPG11-224ENST00000561268 IRF7Q92985 503 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 CHFRQ96EP1 664 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 CCDC34Q96HJ3 373 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 ANKRD36BP1Q96IX9 119 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 LRRC3BQ96PB8 259 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 SEMA4AQ9H3S1 761 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 L2HGDHQ9H9P8 463 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 KIF9Q9HAQ2 790 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 DMAC2Q9NW81 257 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 FBXO4Q9UKT5 387 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 AGAP1Q9UPQ3 857 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 THADAQ6YHU6 1953 aa7.37□□□□□ -1.23
SPG11-224ENST00000561268 ZFHX2Q9C0A1 2572 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 MYBPHLA2RUH7 354 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 HEPACAM2A8MVW5 462 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 MAPK13O15264 365 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 ATP8B1O43520 1251 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 LILRB5O75023 590 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 LRRN2O75325 713 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 RHOBTB3O94955 611 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 OLFM2O95897 454 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 DCNP07585 359 aaKnown RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 TPM1P09493 284 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 CSH1P0DML2 217 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 CSH2P0DML3 217 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 MYL4P12829 197 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 PFKFB1P16118 471 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 DDX6P26196 483 aaKnown RBP eCLIP7.36□□□□□ -1.23
SPG11-224ENST00000561268 GABRR2P28476 465 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 PCSK1P29120 753 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 ME1P48163 572 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 LHX1P48742 406 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 RBP5P82980 135 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 MYL7Q01449 175 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 TSPY1Q01534 308 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 GABPB1Q06547 395 aaPredicted RBP7.36□□□□□ -1.23
SPG11-224ENST00000561268 ENPEPQ07075 957 aa7.36□□□□□ -1.23
SPG11-224ENST00000561268 BFSP1Q12934 665 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms