RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 TGFB1I1O43294 461 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 CLSTN1O94985 981 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 YEATS4O95619 227 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 TNNI1P19237 187 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 GRSF1Q12849 480 aaKnown RBP eCLIP28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 SURF1Q15526 300 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 C4orf50Q6ZRC1 276 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 TRAPPC11Q7Z392 1133 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 SPATA18Q8TC71 538 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 TRMT2BQ96GJ1 504 aaKnown RBP28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 FBRSL1Q9HCM7 1045 aaKnown RBP28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 MAGEC2Q9UBF1 373 aaPredicted RBP28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 CDH9Q9ULB4 789 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 RNF40O75150 1001 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 PAPSS2O95340 614 aaPredicted RBP28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 GRIK1P39086 918 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 FAM160A1Q05DH4 1040 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 ZNF77Q15935 545 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 TMEM196Q5HYL7 178 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 MDH1BQ5I0G3 518 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 FAM171BQ6P995 826 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 GRAMD1CQ8IYS0 662 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 SPRYD3Q8NCJ5 442 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 SCFD1Q8WVM8 642 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 FUBP3Q96I24 572 aaKnown RBP eCLIP28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 FNBP1Q96RU3 617 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 DUS2Q9NX74 493 aaKnown RBP28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 NME7Q9Y5B8 376 aa28.93■■■□□ 2.22
SNRPA1-215ENST00000561187 ANAPC1Q9H1A4 1944 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 AFMP43652 599 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 IFNAR2P48551 515 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 ATXN1P54253 815 aaKnown RBP28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 USP46P62068 366 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 USP4Q13107 963 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 KCNB1Q14721 858 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 ZNF507Q8TCN5 953 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 MYRFLQ96LU7 910 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 CGRRF1Q99675 332 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 SLC39A2Q9NP94 309 aa28.92■■■□□ 2.22
SNRPA1-215ENST00000561187 CST3P01034 146 aaPredicted RBP28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 HSP90AA1P07900 732 aaKnown RBP28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 RETP07949 1114 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 USP17L7P0C7H9 530 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 WARSP23381 471 aaKnown RBP28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 ME1P48163 572 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 CYP24A1Q07973 514 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 ZNF268Q14587 947 aaPredicted RBP28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 UNC13DQ70J99 1090 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 SYNPOQ8N3V7 929 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 CPA6Q8N4T0 437 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 SH3RF2Q8TEC5 729 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 PCED1BQ96HM7 432 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 C7orf25Q9BPX7 421 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 SNX25Q9H3E2 840 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 KIAA1586Q9HCI6 787 aa28.91■■■□□ 2.22
SNRPA1-215ENST00000561187 PTPRDP23468 1912 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 GREB1Q4ZG55 1949 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 DCDC2BA2VCK2 349 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 ANXA13P27216 316 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 GJA4P35212 333 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 MAGEA11P43364 429 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 IFRD2Q12894 506 aaPredicted RBP28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 PDGFRLQ15198 375 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 DPH6Q7L8W6 267 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 HS2ST1Q7LGA3 356 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 LIMS2Q7Z4I7 341 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 HSCBQ8IWL3 235 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 FAM160A2Q8N612 972 aaPredicted RBP28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 FSIP1Q8NA03 581 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 OR6B3Q8NGW1 331 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 HHIPQ96QV1 700 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 DPEP3Q9H4B8 488 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 ECT2Q9H8V3 914 aa28.9■■■□□ 2.22
SNRPA1-215ENST00000561187 RALGAPA1Q6GYQ0 2036 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 TRDMT1O14717 391 aaKnown RBP28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 SCAMP3O14828 347 aaKnown RBP28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 F13A1P00488 732 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 ZSCAN22P10073 491 aaPredicted RBP28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 CASP4P49662 377 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 GALK1P51570 392 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 TNNC1P63316 161 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 CUL4BQ13620 913 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 PKP1Q13835 747 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 PSMD6Q15008 389 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 WDR5BQ86VZ2 330 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 XXYLT1Q8NBI6 393 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 OSCP1Q8WVF1 389 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 ELMO3Q96BJ8 720 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 P2RY13Q9BPV8 354 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 SEMA4GQ9NTN9 838 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 GCNT4Q9P109 453 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 PCDHA7Q9UN72 937 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 SLC8A2Q9UPR5 921 aa28.89■■■□□ 2.22
SNRPA1-215ENST00000561187 UBE4BO95155 1302 aa28.89■■■□□ 2.21
SNRPA1-215ENST00000561187 PRR5-ARHGAP8B1AHC4 643 aa28.88■■■□□ 2.21
SNRPA1-215ENST00000561187 F8VP50 259 aa28.88■■■□□ 2.21
SNRPA1-215ENST00000561187 ARHGAP8P85298 464 aa28.88■■■□□ 2.21
SNRPA1-215ENST00000561187 PSMD2Q13200 908 aa28.88■■■□□ 2.21
SNRPA1-215ENST00000561187 CCDC6Q16204 474 aa28.88■■■□□ 2.21
SNRPA1-215ENST00000561187 WDR72Q3MJ13 1102 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms