RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GALNT6Q8NCL4 622 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 MCUQ8NE86 351 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 MOSPD2Q8NHP6 518 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 NFKBIDQ8NI38 313 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 SCAMP5Q8TAC9 235 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ZCCHC10Q8TBK6 192 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 METTL6Q8TCB7 284 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PIGOQ8TEQ8 1089 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 DEPDC1BQ8WUY9 529 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RAPGEF4Q8WZA2 1011 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 UTP4Q969X6 686 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 EXOC4Q96A65 974 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 VPS33AQ96AX1 596 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RMDN1Q96DB5 314 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 SAT2Q96F10 170 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 NEIL1Q96FI4 390 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 DYDC2Q96IM9 177 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 MRGPRX1Q96LB2 322 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CCDC114Q96M63 670 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 UIMC1Q96RL1 719 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CD180Q99467 661 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 C1orf43Q9BWL3 253 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 KRTAP3-3Q9BYR6 98 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 KRTAP3-2Q9BYR7 98 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 SLC25A18Q9H1K4 315 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 C2orf40Q9H1Z8 148 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 RANBP17Q9H2T7 1088 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 MRPL46Q9H2W6 279 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 CDIP1Q9H305 208 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 TP63Q9H3D4 680 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 SERHL2Q9H4I8 314 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PRDM12Q9H4Q4 367 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 LDAHQ9H6V9 325 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ZBTB26Q9HCK0 441 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PRDM8Q9NQV8 689 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 INTS10Q9NVR2 710 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 PPP1R14DQ9NXH3 145 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 COQ3Q9NZJ6 369 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 SAE1Q9UBE0 346 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 TNFRSF10DQ9UBN6 386 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ZNF70Q9UC06 446 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 EIF2B4Q9UI10 523 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 CORO1CQ9ULV4 474 aaPredicted RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 HSF4Q9ULV5 492 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 SCAF8Q9UPN6 1271 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 SMG5Q9UPR3 1016 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 RUVBL1Q9Y265 456 aaKnown RBP2.21□□□□□ -2.06
RTF1-207ENST00000561076 KLHL20Q9Y2M5 609 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 MED16Q9Y2X0 877 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 STARD13Q9Y3M8 1113 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PLEKHM1Q9Y4G2 1056 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PCDHGB5Q9Y5G0 923 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 ACTL7AQ9Y615 435 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 PSAT1Q9Y617 370 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 CAPN6Q9Y6Q1 641 aa2.21□□□□□ -2.06
RTF1-207ENST00000561076 FLT1P17948 1338 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 A0A0A6YYJ9 748 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 A0A1W2PQ45 241 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 A0A1W2PQY0 241 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 SYCE3A1L190 88 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 VWA3AA6NCI4 1184 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 EIF3CLB5ME19 914 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 H3BNC9 293 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 F2RL2O00254 374 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 IGF2BP3O00425 579 aaKnown RBP eCLIP2.2□□□□□ -2.06
RTF1-207ENST00000561076 KIAA0391O15091 583 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 MUSKO15146 869 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PRPF4O43172 522 aaKnown RBP eCLIP2.2□□□□□ -2.06
RTF1-207ENST00000561076 TXNL1O43396 289 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 KERAO60938 352 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TULP3O75386 442 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 DEAF1O75398 565 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 LEFTY1O75610 366 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ERAL1O75616 437 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 PIAS2O75928 621 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 UNC5CO95185 931 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 GOSR1O95249 250 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 LARGE1O95461 756 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ABHD16AO95870 558 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 GJB1P08034 283 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ENO2P09104 434 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 CSF1P09603 554 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 CCDC175P0C221 793 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 TMIGD3P0DMS9 266 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 RAP2AP10114 183 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 MYBL1P10243 752 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 NR2F1P10589 423 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 BMP3P12645 472 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 LAMP2P13473 410 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 PECAM1P16284 738 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 FAHP16930 419 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 IL11P20809 199 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 MAP4P27816 1152 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 GABRB3P28472 473 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 HSPA4P34932 840 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 MSX2P35548 267 aaPredicted RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 BSGP35613 385 aa2.2□□□□□ -2.06
RTF1-207ENST00000561076 ANP32AP39687 249 aaKnown RBP2.2□□□□□ -2.06
RTF1-207ENST00000561076 PSMB10P40306 273 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms