RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MDGA1Q8NFP4 955 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 SH3RF2Q8TEC5 729 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 ZCCHC14Q8WYQ9 949 aaKnown RBP19.92■□□□□ 0.78
TPM1-226ENST00000560959 PIGKQ92643 395 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 PKMYT1Q99640 499 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 DMXL2Q8TDJ6 3036 aa19.92■□□□□ 0.78
TPM1-226ENST00000560959 FAM221BA6H8Z2 402 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 H0Y626 953 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 TRIM16O95361 564 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 HDCP19113 662 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 HOXD12P35452 270 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 P2RY2P41231 377 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 MYL7Q01449 175 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 BYSLQ13895 437 aaKnown RBP19.91■□□□□ 0.78
TPM1-226ENST00000560959 UAP1L1Q3KQV9 507 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 C2orf27AQ580R0 203 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 TRIM61Q5EBN2 209 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 LMBRD2Q68DH5 695 aaPredicted RBP19.91■□□□□ 0.78
TPM1-226ENST00000560959 SLC23A3Q6PIS1 610 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 CRELD2Q6UXH1 353 aaPredicted RBP19.91■□□□□ 0.78
TPM1-226ENST00000560959 PIP4P1Q86T03 277 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 ARL14EPQ8N8R7 260 aaPredicted RBP19.91■□□□□ 0.78
TPM1-226ENST00000560959 LRRC15Q8TF66 581 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 CALML4Q96GE6 196 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 DDX43Q9NXZ2 648 aaKnown RBP19.91■□□□□ 0.78
TPM1-226ENST00000560959 NUP205Q92621 2012 aa19.91■□□□□ 0.78
TPM1-226ENST00000560959 A0A0A0MRY4 1105 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 HUS1O60921 280 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 RDXP35241 583 aaKnown RBP19.9■□□□□ 0.78
TPM1-226ENST00000560959 EIF2DP41214 584 aaKnown RBP19.9■□□□□ 0.78
TPM1-226ENST00000560959 MAGEA11P43364 429 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 LHX1P48742 406 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 RING1Q06587 406 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 KCNB1Q14721 858 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 LRRC52Q8N7C0 313 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 STKLD1Q8NE28 680 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 SPACA7Q96KW9 195 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 GDAP2Q9NXN4 497 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 GTF3C4Q9UKN8 822 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 L1RE1Q9UN81 338 aa19.9■□□□□ 0.78
TPM1-226ENST00000560959 ZNF638Q14966 1978 aaKnown RBP19.9■□□□□ 0.78
TPM1-226ENST00000560959 GABRDO14764 452 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 SEMA3BQ13214 749 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 GAB4Q2WGN9 574 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 PEAR1Q5VY43 1037 aaPredicted RBP19.89■□□□□ 0.77
TPM1-226ENST00000560959 SPATA2LQ8IUW3 424 aaPredicted RBP19.89■□□□□ 0.77
TPM1-226ENST00000560959 ADGRG2Q8IZP9 1017 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 WHAMMQ8TF30 809 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 CACTINQ8WUQ7 758 aaKnown RBP19.89■□□□□ 0.77
TPM1-226ENST00000560959 HVCN1Q96D96 273 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 SPATA17Q96L03 361 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 FNBP1Q96RU3 617 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 POLMQ9NP87 494 aaPredicted RBP19.89■□□□□ 0.77
TPM1-226ENST00000560959 BLOC1S4Q9NUP1 217 aa19.89■□□□□ 0.77
TPM1-226ENST00000560959 PKD1L2Q7Z442 2459 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 ANK1P16157 1881 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 C2orf78A6NCI8 922 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 MYMKA6NI61 221 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 HYAL3O43820 417 aaPredicted RBP19.88■□□□□ 0.77
TPM1-226ENST00000560959 TBCAO75347 108 aaKnown RBP19.88■□□□□ 0.77
TPM1-226ENST00000560959 ENGP17813 658 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 PCSK1P29120 753 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 ADSSP30520 456 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 UBA7P41226 1012 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 SEC13P55735 322 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 FAM171BQ6P995 826 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 TMEM92Q6UXU6 159 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 ZNF720Q7Z2F6 126 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 TOP6BLQ8N6T0 577 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 POMGNT1Q8WZA1 660 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 LHX6Q9UPM6 363 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 AGAP1Q9UPQ3 857 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 KIF3AQ9Y496 699 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 THADAQ6YHU6 1953 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 OBSL1O75147 1896 aa19.88■□□□□ 0.77
TPM1-226ENST00000560959 FASNP49327 2511 aaKnown RBP19.87■□□□□ 0.77
TPM1-226ENST00000560959 PCNX2A6NKB5 2137 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 AKAP13Q12802 2813 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 TISP43B9A030 160 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 SLC9A3R1O14745 358 aaPredicted RBP19.87■□□□□ 0.77
TPM1-226ENST00000560959 MAP3K13O43283 966 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 KRT18P05783 430 aaKnown RBP19.87■□□□□ 0.77
TPM1-226ENST00000560959 POLR2BP30876 1174 aaKnown RBP19.87■□□□□ 0.77
TPM1-226ENST00000560959 PPP3CCP48454 512 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 HNRNPDQ14103 355 aaKnown RBP19.87■□□□□ 0.77
TPM1-226ENST00000560959 ZC2HC1CQ53FD0 456 aaPredicted RBP19.87■□□□□ 0.77
TPM1-226ENST00000560959 EOGTQ5NDL2 527 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 VSTM1Q6UX27 236 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 DPH6Q7L8W6 267 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 CCDC33Q8N5R6 958 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 C1orf127Q8N9H9 656 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 IL17RCQ8NAC3 791 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 TTC16Q8NEE8 873 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 CEP76Q8TAP6 659 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 CXorf38Q8TB03 319 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 ZHX3Q9H4I2 956 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 TMEM74BQ9NUR3 256 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 EHD2Q9NZN4 543 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 PILRBQ9UKJ0 227 aa19.87■□□□□ 0.77
TPM1-226ENST00000560959 KIAA1549LQ6ZVL6 1849 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms