RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ADARB2-AS1A8MUL3 147 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 KPNA7A9QM74 516 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 C5orf67F2Z3F1 127 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 FOXN3O00409 490 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 NRP1O14786 923 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 TBC1D4O60343 1298 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 PHACTR2O75167 634 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 CILPO75339 1184 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 OAZ2O95190 189 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 ATP2A2P16615 1042 aaKnown RBP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 TYMPP19971 482 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 WARSP23381 471 aaKnown RBP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 PRKCIP41743 596 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 PIK3CAP42336 1068 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 SLC11A1P49279 550 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 TAF6P49848 677 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 FXR1P51114 621 aaKnown RBP eCLIP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 CLCNKBP51801 687 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 MFAP3P55082 362 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 BCAR1P56945 870 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 PLCB3Q01970 1234 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 APBA1Q02410 837 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 CENPCQ03188 943 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 MYO1EQ12965 1108 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 BIRC3Q13489 604 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 TRPC3Q13507 836 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 CUL2Q13617 745 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 SOWAHAQ2M3V2 549 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 ZNF699Q32M78 642 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 WDR72Q3MJ13 1102 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 SV2CQ496J9 727 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 TIGD5Q53EQ6 642 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 ZNF667Q5HYK9 610 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 SPOPLQ6IQ16 392 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 PDXDC1Q6P996 788 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 IRF2BP2Q7Z5L9 587 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 UNC93AQ86WB7 457 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 DTX1Q86Y01 620 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 CREBRFQ8IUR6 639 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 FMNL3Q8IVF7 1028 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 CRYBG2Q8N1P7 616 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 SLC39A11Q8N1S5 342 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 TMEM86AQ8N2M4 240 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 TC2NQ8N9U0 490 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 RNF169Q8NCN4 708 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 NEK11Q8NG66 645 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 OLIG1Q8TAK6 271 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 KBTBD7Q8WVZ9 684 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 KAT5Q92993 513 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 PANX2Q96RD6 677 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 PI4K2AQ9BTU6 479 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 COLEC11Q9BWP8 271 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 LSM14BQ9BX40 385 aaKnown RBP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 SDCBP2Q9H190 292 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 MMRN2Q9H8L6 949 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 UBE2TQ9NPD8 197 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 CHST7Q9NS84 486 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 FAM207AQ9NSI2 230 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 DNAJB4Q9UDY4 337 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 STK39Q9UEW8 545 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 DNAJC12Q9UKB3 198 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 AJAP1Q9UKB5 411 aaPredicted RBP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 L1RE1Q9UN81 338 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 INPP5FQ9Y2H2 1132 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 PCDHA11Q9Y5I1 949 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 FHOD1Q9Y613 1164 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 MRPL42Q9Y6G3 142 aaKnown RBP5.85□□□□□ -1.47
ZEB1-220ENST00000560909 RALGAPA2Q2PPJ7 1873 aa5.85□□□□□ -1.47
ZEB1-220ENST00000560909 TRANK1O15050 2925 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 A0A1W2PPC1 479 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ARHGEF37A1IGU5 675 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 CASTOR2A6NHX0 329 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 F8VZ95 297 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 SYN3O14994 580 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 MFAP3LO75121 409 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 B3GAT3O94766 335 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 KIF4AO95239 1232 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 C1RP00736 705 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ITGB1P05556 798 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 RB1P06400 928 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 PAEPP09466 180 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 P4HA1P13674 534 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 LAG3P18627 525 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 TRIM21P19474 475 aaKnown RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ANXA13P27216 316 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 CASP14P31944 242 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 GSDMDP57764 484 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 POLR2FP61218 127 aaKnown RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ERVK-21P61565 698 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 RNASELQ05823 741 aaKnown RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ELAVL2Q12926 359 aaKnown RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 BTG3Q14201 252 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 DRAP1Q14919 205 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 PTPN21Q16825 1174 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 ASTE1Q2TB18 679 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 E4F1Q66K89 784 aaPredicted RBP5.84□□□□□ -1.47
ZEB1-220ENST00000560909 HGSNATQ68CP4 663 aa5.84□□□□□ -1.47
ZEB1-220ENST00000560909 GJB7Q6PEY0 223 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms