RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 SPACA7Q96KW9 195 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 DRC1Q96MC2 740 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 YTHDC1Q96MU7 727 aaKnown RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 PI4K2AQ9BTU6 479 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 TRPC7Q9HCX4 862 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ZDHHC4Q9NPG8 344 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 ABI2Q9NYB9 513 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 GCNT4Q9P109 453 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 LRWD1Q9UFC0 647 aa9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-217ENST00000560521 CYSRT1A8MQ03 144 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 CYB561D2O14569 222 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 ADAM23O75077 832 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 PRPF40AO75400 957 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 KLF8O95600 359 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 PRB1P04280 392 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 PAX3P23760 479 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 HOXD12P35452 270 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 TIE1P35590 1138 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 SLC6A11P48066 632 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 RAD51AP2Q09MP3 1159 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 NBR1Q14596 966 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 SAFBQ15424 915 aaKnown RBP eCLIP9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 WSCD1Q658N2 575 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 KCNK18Q7Z418 384 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 SLCO6A1Q86UG4 719 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 THEM5Q8N1Q8 247 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 ARL14EPQ8N8R7 260 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 SH3RF2Q8TEC5 729 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 HMGB4Q8WW32 186 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 CRELD1Q96HD1 420 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 MYRFLQ96LU7 910 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 TSPAN18Q96SJ8 248 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 TMEM206Q9H813 350 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 RPF1Q9H9Y2 349 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 POLMQ9NP87 494 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 DNAAF2Q9NVR5 837 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 DSEQ9UL01 958 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 DNM3Q9UQ16 869 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 PCDHB5Q9Y5E4 795 aa9.65□□□□□ -0.86
RABGGTA-217ENST00000560521 A0A0A0MRY4 1105 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 TRAV19A0A0A6YYK7 116 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 C2orf78A6NCI8 922 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 EPB41L2O43491 1005 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 NOL4O94818 638 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 NFATC1O95644 943 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 CKMP06732 381 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 NFICP08651 508 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 PLS3P13797 630 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 TCF3P15923 654 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 CYP2F1P24903 491 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 KIR2DL1P43626 348 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 ZNF33AQ06730 810 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 SLC14A1Q13336 389 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 ORC2Q13416 577 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 BYSLQ13895 437 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 PDIA5Q14554 519 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 DDR2Q16832 855 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 LMBRD2Q68DH5 695 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 METTL23Q86XA0 190 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 SLC41A1Q8IVJ1 513 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 DCP1BQ8IZD4 617 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 ADGRG2Q8IZP9 1017 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 IGSF22Q8N9C0 903 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 NSUN7Q8NE18 718 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 SNX29Q8TEQ0 813 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 TRMT2BQ96GJ1 504 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 PYM1Q9BRP8 204 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 BCCIPQ9P287 314 aaKnown RBP eCLIP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 UXTQ9UBK9 157 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 PCDHB9Q9Y5E1 797 aa9.64□□□□□ -0.87
RABGGTA-217ENST00000560521 TCRBV21S2A2A0A5A6 115 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 PP2D1A8MPX8 630 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 OGTO15294 1046 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 AP5Z1O43299 807 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 JAK2O60674 1132 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 CYP17A1P05093 508 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 HDCP19113 662 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 CDC25AP30304 524 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 TAF6P49848 677 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 SMTNP53814 917 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 GUCY1B3Q02153 619 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 RPL6Q02878 288 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 NUMA1Q14980 2115 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 KYAT1Q16773 422 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 ME3Q16798 604 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 EOGTQ5NDL2 527 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 TOGARAM2Q6ZUX3 1019 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 C12orf40Q86WS4 652 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 CD302Q8IX05 232 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 GTF3C6Q969F1 213 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 PNKPQ96T60 521 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 CCSER1Q9C0I3 900 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 DKK4Q9UBT3 224 aa9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 KCNG1Q9UIX4 513 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms