RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 GNL1P36915 607 aaPredicted RBP15.71■□□□□ 0.11
IDH3A-219ENST00000560414 GCGRP47871 477 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 TNNC1P63316 161 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 CLDN10P78369 228 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 PRKCQQ04759 706 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 CFAP221Q4G0U5 840 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 TPRG1Q6ZUI0 275 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 TMEM150AQ86TG1 271 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 MFSD6LQ8IWD5 586 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 SCN4BQ8IWT1 228 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 GUF1Q8N442 669 aaKnown RBP15.71■□□□□ 0.11
IDH3A-219ENST00000560414 ENGASEQ8NFI3 743 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 PJA1Q8NG27 643 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 OR6B3Q8NGW1 331 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 DEPDC1BQ8WUY9 529 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 ERCC4Q92889 916 aaPredicted RBP15.71■□□□□ 0.11
IDH3A-219ENST00000560414 MYLPFQ96A32 169 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 SYAP1Q96A49 352 aaPredicted RBP15.71■□□□□ 0.11
IDH3A-219ENST00000560414 LRRC3BQ96PB8 259 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 DDX23Q9BUQ8 820 aaKnown RBP15.71■□□□□ 0.11
IDH3A-219ENST00000560414 SLC46A2Q9BY10 475 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 SMG9Q9H0W8 520 aaKnown RBP15.71■□□□□ 0.11
IDH3A-219ENST00000560414 SNX25Q9H3E2 840 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 TASP1Q9H6P5 420 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 MAGEC2Q9UBF1 373 aaPredicted RBP15.71■□□□□ 0.11
IDH3A-219ENST00000560414 FRMD4BQ9Y2L6 1034 aa15.71■□□□□ 0.11
IDH3A-219ENST00000560414 SHISA7A6NL88 538 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 SLC38A8A6NNN8 435 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 ZNF263O14978 683 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 TACC1O75410 805 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 PRAMEF12O95522 483 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 STAU1O95793 577 aaKnown RBP15.7■□□□□ 0.1
IDH3A-219ENST00000560414 F11P03951 625 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 CSH1P0DML2 217 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 CSH2P0DML3 217 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 BDNFP23560 247 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 NR2F2P24468 414 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 ATICP31939 592 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 MRE11P49959 708 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 AP3M2P53677 418 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 CDH8P55286 799 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 NLRP12P59046 1061 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 RPL10AP62906 217 aaKnown RBP15.7■□□□□ 0.1
IDH3A-219ENST00000560414 CYP27A1Q02318 531 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 NCOA4Q13772 614 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 UBXN2BQ14CS0 331 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 C1orf220Q5T0J3 134 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 DNASE1L2Q92874 299 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 IRF7Q92985 503 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 FUBP3Q96I24 572 aaKnown RBP eCLIP15.7■□□□□ 0.1
IDH3A-219ENST00000560414 GCNAQ96QF7 691 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 DPEP3Q9H4B8 488 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 DLGAP2Q9P1A6 1054 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 PIEZO1Q92508 2521 aa15.7■□□□□ 0.1
IDH3A-219ENST00000560414 FAM170BA6NMN3 283 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 AKAP3O75969 853 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 RAP1GAPP47736 663 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 FAM160A1Q05DH4 1040 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 ANGPT1Q15389 498 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 ZNF699Q32M78 642 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 MDH1BQ5I0G3 518 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 TXNDC8Q6A555 127 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 SCARA5Q6ZMJ2 495 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 C4orf50Q6ZRC1 276 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 SV2AQ7L0J3 742 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 YAF2Q8IY57 180 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 MAB21L3Q8N8X9 362 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 MYCBPAPQ8TBZ2 947 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 E2F7Q96AV8 911 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 EEF2KMTQ96G04 330 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 PCED1BQ96HM7 432 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 IRF2BPLQ9H1B7 796 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 SMYD3Q9H7B4 428 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 LTB4R2Q9NPC1 389 aa15.69■□□□□ 0.1
IDH3A-219ENST00000560414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.69■□□□□ 0.16e-6■■■■■ 48.1
IDH3A-219ENST00000560414 F5P12259 2224 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 A8MXQ7 604 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 TADA3O75528 432 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 NOL4O94818 638 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 FAM163BP0C2L3 166 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 TRIM49P0CI25 452 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 TRIM49CP0CI26 452 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 PTPN1P18031 435 aaKnown RBP15.68■□□□□ 0.1
IDH3A-219ENST00000560414 TARSP26639 723 aaKnown RBP15.68■□□□□ 0.1
IDH3A-219ENST00000560414 GRIK1P39086 918 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 MAGEA11P43364 429 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 VAMP7P51809 220 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 ADAM9Q13443 819 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 NFIL3Q16649 462 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 ZACNQ401N2 412 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 ZCWPW2Q504Y3 356 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 ZNF667Q5HYK9 610 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 ZFYVE19Q96K21 471 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 SDCBP2Q9H190 292 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 VRTNQ9H8Y1 702 aa15.68■□□□□ 0.1
IDH3A-219ENST00000560414 ARNTLO00327 626 aa15.67■□□□□ 0.1
IDH3A-219ENST00000560414 CLDN5O00501 218 aa15.67■□□□□ 0.1
IDH3A-219ENST00000560414 RPL13P26373 211 aaKnown RBP15.67■□□□□ 0.1
IDH3A-219ENST00000560414 PRCPP42785 496 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms