RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 GOLGA8SH3BPF8 625 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 DDHD2O94830 711 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 FGGP02679 453 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 TKTP29401 623 aaKnown RBP15.24■□□□□ 0.03
ZEB1-218ENST00000560196 RFC1P35251 1148 aaPredicted RBP15.24■□□□□ 0.03
ZEB1-218ENST00000560196 OGDHQ02218 1023 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 BRD3Q15059 726 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 ARCQ7LC44 396 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 NPAS4Q8IUM7 802 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 KATNAL2Q8IYT4 538 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 KCTD13Q8WZ19 329 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 CASD1Q96PB1 797 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 LPIN3Q9BQK8 851 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 RTP3Q9BQQ7 232 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 CRTAC1Q9NQ79 661 aa15.24■□□□□ 0.03
ZEB1-218ENST00000560196 METTL5Q9NRN9 209 aaKnown RBP15.24■□□□□ 0.03
ZEB1-218ENST00000560196 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.23■□□□□ 0.03
ZEB1-218ENST00000560196 TULP2O00295 520 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 KRIT1O00522 736 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 DPYSL4O14531 572 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 GABBR2O75899 941 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 RHOXF2BP0C7M4 288 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 PYGMP11217 842 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 NPR3P17342 541 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 IBSPP21815 317 aaPredicted RBP15.23■□□□□ 0.03
ZEB1-218ENST00000560196 ADORA2BP29275 332 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 BRCC3P46736 316 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 CTCFP49711 727 aaPredicted RBP15.23■□□□□ 0.03
ZEB1-218ENST00000560196 SLC8A3P57103 927 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 TAS2R40P59535 323 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 SLC6A3Q01959 620 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 LONRF2Q1L5Z9 754 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 TCTN1Q2MV58 587 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 FAM102AQ5T9C2 384 aaPredicted RBP15.23■□□□□ 0.03
ZEB1-218ENST00000560196 KIAA0319Q5VV43 1072 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 OR6B2Q6IFH4 312 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 CC2D1AQ6P1N0 951 aaPredicted RBP15.23■□□□□ 0.03
ZEB1-218ENST00000560196 FAM171BQ6P995 826 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 OLFML1Q6UWY5 402 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 FAM183BPQ6ZVS7 135 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 PAQR9Q6ZVX9 377 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 POLNQ7Z5Q5 900 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 ZNF280BQ86YH2 543 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 EXD1Q8NHP7 514 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 JOSD2Q8TAC2 188 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 DIS3LQ8TF46 1054 aaKnown RBP15.23■□□□□ 0.03
ZEB1-218ENST00000560196 MAIP1Q8WWC4 291 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 SCLYQ96I15 445 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 FAM193BQ96PV7 902 aaPredicted RBP15.23■□□□□ 0.03
ZEB1-218ENST00000560196 NCAPGQ9BPX3 1015 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 RHOXF2Q9BQY4 288 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 MRPL9Q9BYD2 267 aaKnown RBP15.23■□□□□ 0.03
ZEB1-218ENST00000560196 B3GNT5Q9BYG0 378 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 UBXN6Q9BZV1 441 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 C11orf49Q9H6J7 331 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 ST7Q9NRC1 585 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 LRFN2Q9ULH4 789 aa15.23■□□□□ 0.03
ZEB1-218ENST00000560196 HTTP42858 3142 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 GOLGA6L10A0A0M3HER8 536 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 CCDC151A5D8V7 595 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 C2CD4BA6NLJ0 364 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 F8VP50 259 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 FSCN2O14926 492 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 PAPSS1O43252 624 aaPredicted RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 B4GALT3O60512 393 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 ATP2C2O75185 946 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 CLTBP09497 229 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 FAM200BP0CF97 657 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 ACAT1P24752 427 aaKnown RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 PSMA2P25787 234 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 CYP2C18P33260 490 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 PCK1P35558 622 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 RGS7P49802 495 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 ZNF143P52747 638 aaPredicted RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 CCL23P55773 120 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 RNASE9P60153 205 aaKnown RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 RNASELQ05823 741 aaKnown RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 ZNF211Q13398 564 aaPredicted RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 MDH1BQ5I0G3 518 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 CNKSR3Q6P9H4 555 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 FBXO38Q6PIJ6 1188 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 SLC26A9Q7LBE3 791 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 SLC13A5Q86YT5 568 aaPredicted RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 ABI1Q8IZP0 508 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 THEM5Q8N1Q8 247 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 MYCBPAPQ8TBZ2 947 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 PKMYT1Q99640 499 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 TMEM175Q9BSA9 504 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 CNPY3Q9BT09 278 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 EPC1Q9H2F5 836 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 ASNSD1Q9NWL6 643 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 DDX56Q9NY93 547 aaKnown RBP15.22■□□□□ 0.03
ZEB1-218ENST00000560196 TSC2P49815 1807 aa15.22■□□□□ 0.03
ZEB1-218ENST00000560196 TTC3P53804 2025 aa15.21■□□□□ 0.03
ZEB1-218ENST00000560196 TRAPPC3O43617 180 aa15.21■□□□□ 0.03
ZEB1-218ENST00000560196 GPD1P21695 349 aa15.21■□□□□ 0.03
ZEB1-218ENST00000560196 PTPN7P35236 360 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms