RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 HSD3B7Q9H2F3 369 aa22.03■■□□□ 1.12
PSEN1-225ENST00000560005 POLR3BQ9NW08 1133 aaPredicted RBP22.03■■□□□ 1.12
PSEN1-225ENST00000560005 ARHGAP28Q9P2N2 729 aa22.03■■□□□ 1.12
PSEN1-225ENST00000560005 ATG2BQ96BY7 2078 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 EML5Q05BV3 1969 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 GIPC1O14908 333 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 HIP1RO75146 1068 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 SOAT2O75908 522 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 TPM2P07951 284 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 EEF1GP26641 437 aaKnown RBP22.02■■□□□ 1.12
PSEN1-225ENST00000560005 FOXC1Q12948 553 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 GPR17Q13304 367 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 DMP1Q13316 513 aaPredicted RBP22.02■■□□□ 1.12
PSEN1-225ENST00000560005 BMT2Q1RMZ1 405 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 PLK5Q496M5 336 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 ARHGAP15Q53QZ3 475 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 FSTL4Q6MZW2 842 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 CSGALNACT2Q8N6G5 542 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 TTC9BQ8N6N2 239 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 ATAD1Q8NBU5 361 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 EDEM2Q9BV94 578 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 OXCT2Q9BYC2 517 aaPredicted RBP22.02■■□□□ 1.12
PSEN1-225ENST00000560005 SMG9Q9H0W8 520 aaKnown RBP22.02■■□□□ 1.12
PSEN1-225ENST00000560005 KMT5AQ9NQR1 393 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 ANKFY1Q9P2R3 1169 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 ASB3Q9Y575 518 aa22.02■■□□□ 1.12
PSEN1-225ENST00000560005 MTMR11A4FU01 709 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 OR6C75A6NL08 312 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 AP5Z1O43299 807 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 ATG13O75143 517 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 PTMAP06454 111 aaKnown RBP22.01■■□□□ 1.11
PSEN1-225ENST00000560005 SMTNP53814 917 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 CYP4F8P98187 520 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 USP37Q86T82 979 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 DAW1Q8N136 415 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 ZNF507Q8TCN5 953 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 SAMSN1Q9NSI8 373 aaKnown RBP22.01■■□□□ 1.11
PSEN1-225ENST00000560005 PKD1L2Q7Z442 2459 aa22.01■■□□□ 1.11
PSEN1-225ENST00000560005 LRRC10BA6NIK2 292 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 H0YCG3 227 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 FGF19O95750 216 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 PLS3P13797 630 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 SPINK2P20155 84 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 FKBP3Q00688 224 aaKnown RBP22■■□□□ 1.11
PSEN1-225ENST00000560005 ZNF252P-AS1Q0IIN9 211 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 GRSF1Q12849 480 aaKnown RBP eCLIP22■■□□□ 1.11
PSEN1-225ENST00000560005 EDRF1Q3B7T1 1238 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 TMEM196Q5HYL7 178 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 ANKRD40Q6AI12 368 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 EPM2AIP1Q7L775 607 aaPredicted RBP22■■□□□ 1.11
PSEN1-225ENST00000560005 KDF1Q8NAX2 398 aaPredicted RBP22■■□□□ 1.11
PSEN1-225ENST00000560005 HPS3Q969F9 1004 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 HHIPQ96QV1 700 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 SRRTQ9BXP5 876 aaKnown RBP22■■□□□ 1.11
PSEN1-225ENST00000560005 TASP1Q9H6P5 420 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 THG1LQ9NWX6 298 aaKnown RBP22■■□□□ 1.11
PSEN1-225ENST00000560005 TBC1D7Q9P0N9 293 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 IFNKQ9P0W0 207 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 LIMA1Q9UHB6 759 aaKnown RBP22■■□□□ 1.11
PSEN1-225ENST00000560005 AKAP13Q12802 2813 aa22■■□□□ 1.11
PSEN1-225ENST00000560005 C4orf47A7E2U8 309 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 PDXKO00764 312 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 CALUO43852 315 aaPredicted RBP21.99■■□□□ 1.11
PSEN1-225ENST00000560005 RNF40O75150 1001 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 GCNT3O95395 438 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 GNA14O95837 355 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 CXCL8P10145 99 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 AARSP49588 968 aaKnown RBP eCLIP21.99■■□□□ 1.11
PSEN1-225ENST00000560005 CREB5Q02930 508 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 NOLC1Q14978 699 aaKnown RBP eCLIP21.99■■□□□ 1.11
PSEN1-225ENST00000560005 KNOP1Q1ED39 458 aaKnown RBP21.99■■□□□ 1.11
PSEN1-225ENST00000560005 DSTYKQ6XUX3 929 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 ZNF720Q7Z2F6 126 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 ITIH5Q86UX2 942 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 GOLGA5Q8TBA6 731 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 SCFD1Q8WVM8 642 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 CEP63Q96MT8 703 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 DUSP15Q9H1R2 295 aaPredicted RBP21.99■■□□□ 1.11
PSEN1-225ENST00000560005 ST6GALNAC4Q9H4F1 302 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 GKN1Q9NS71 199 aa21.99■■□□□ 1.11
PSEN1-225ENST00000560005 SLC16A4O15374 487 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 ATP1A3P13637 1013 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 RPL13P26373 211 aaKnown RBP21.98■■□□□ 1.11
PSEN1-225ENST00000560005 WEE1P30291 646 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 LRPAP1P30533 357 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 ELF2Q15723 593 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 OVOS1Q6IE37 1185 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 CAMKK1Q8N5S9 505 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 CHFRQ96EP1 664 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 DUSP9Q99956 384 aaKnown RBP21.98■■□□□ 1.11
PSEN1-225ENST00000560005 LPIN3Q9BQK8 851 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 XPO4Q9C0E2 1151 aaKnown RBP21.98■■□□□ 1.11
PSEN1-225ENST00000560005 HPS4Q9NQG7 708 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 CGNQ9P2M7 1197 aaKnown RBP21.98■■□□□ 1.11
PSEN1-225ENST00000560005 IMPACTQ9P2X3 320 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 WASF3Q9UPY6 502 aa21.98■■□□□ 1.11
PSEN1-225ENST00000560005 OTOL1A6NHN0 477 aaPredicted RBP21.97■■□□□ 1.11
PSEN1-225ENST00000560005 KCNJ18B7U540 433 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 DCLK1O15075 740 aa21.97■■□□□ 1.11
PSEN1-225ENST00000560005 TOM1L1O75674 476 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms