RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 FBRSL1Q9HCM7 1045 aaKnown RBP14.05□□□□□ -0.16
TPM1-220ENST00000559556 PDE11AQ9HCR9 933 aa14.05□□□□□ -0.16
TPM1-220ENST00000559556 GTF3C4Q9UKN8 822 aa14.05□□□□□ -0.16
TPM1-220ENST00000559556 SLC8A2Q9UPR5 921 aa14.05□□□□□ -0.16
TPM1-220ENST00000559556 SNX9Q9Y5X1 595 aa14.05□□□□□ -0.16
TPM1-220ENST00000559556 CKAP5Q14008 2032 aa14.05□□□□□ -0.16
TPM1-220ENST00000559556 A0A087X0B3 334 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 GOLGA8IPA6NC78 632 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 GOLGA8JA6NMD2 632 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 KIAA0391O15091 583 aaKnown RBP14.04□□□□□ -0.16
TPM1-220ENST00000559556 CKMP06732 381 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 USP17L7P0C7H9 530 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 TMEM191BP0C7N4 346 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 ZNF806P0C7X5 589 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 CCDC192P0DO97 292 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 IDEP14735 1019 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 TCF3P15923 654 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 STAT6P42226 847 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 MAGEA11P43364 429 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 SF3A2Q15428 464 aaKnown RBP14.04□□□□□ -0.16
TPM1-220ENST00000559556 SOWAHAQ2M3V2 549 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 PLA2G2CQ5R387 149 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 NAIF1Q69YI7 327 aaPredicted RBP14.04□□□□□ -0.16
TPM1-220ENST00000559556 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 SPATA2LQ8IUW3 424 aaPredicted RBP14.04□□□□□ -0.16
TPM1-220ENST00000559556 GPD1LQ8N335 351 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 OSCP1Q8WVF1 389 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 EZH1Q92800 747 aaPredicted RBP14.04□□□□□ -0.16
TPM1-220ENST00000559556 ATP2A3Q93084 1043 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 EXOC4Q96A65 974 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 P2RY13Q9BPV8 354 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 ARRDC1-AS1Q9H2J1 176 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 ECT2Q9H8V3 914 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 GCNT4Q9P109 453 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 PCDHGA5Q9Y5G8 931 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 PTPRJQ12913 1337 aa14.04□□□□□ -0.16
TPM1-220ENST00000559556 AXIN1O15169 862 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 HCRTO43612 131 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 KRT19P08727 400 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 GALK1P51570 392 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 RBP5P82980 135 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 EML3Q32P44 896 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 AASDHQ4L235 1098 aaPredicted RBP14.03□□□□□ -0.16
TPM1-220ENST00000559556 C4orf50Q6ZRC1 276 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 SYT13Q7L8C5 426 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 DPH6Q7L8W6 267 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 FSIP1Q8NA03 581 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 C12orf50Q8NA57 414 aaPredicted RBP14.03□□□□□ -0.16
TPM1-220ENST00000559556 RPLP0P6Q8NHW5 317 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 KBTBD7Q8WVZ9 684 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 ACDQ96AP0 544 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 ANKRD36BP1Q96IX9 119 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 CEP295NLQ96MC4 621 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 HHIPQ96QV1 700 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 CYP2S1Q96SQ9 504 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 PCIF1Q9H4Z3 704 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 TRPC7Q9HCX4 862 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 PANK4Q9NVE7 773 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 INTS13Q9NVM9 706 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 DUS2Q9NX74 493 aaKnown RBP14.03□□□□□ -0.16
TPM1-220ENST00000559556 PCDH15Q96QU1 1955 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 CABIN1Q9Y6J0 2220 aa14.03□□□□□ -0.16
TPM1-220ENST00000559556 TM4SF5O14894 197 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 SYT1P21579 422 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 IFNAR2P48551 515 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 MYO1EQ12965 1108 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 KCNB1Q14721 858 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 CCDC6Q16204 474 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 PLK5Q496M5 336 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 LMBRD2Q68DH5 695 aaPredicted RBP14.02□□□□□ -0.17
TPM1-220ENST00000559556 IL31Q6EBC2 164 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 FAM173BQ6P4H8 233 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 VSTM1Q6UX27 236 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 OR5B17Q8NGF7 314 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 CD101Q93033 1021 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 SPATA17Q96L03 361 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 SYT15Q9BQS2 421 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 RXFP3Q9NSD7 469 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 POLR3BQ9NW08 1133 aaPredicted RBP14.02□□□□□ -0.17
TPM1-220ENST00000559556 EBF1Q9UH73 591 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 ARHGAP26Q9UNA1 814 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 WNT6Q9Y6F9 365 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 FREM2Q5SZK8 3169 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 ITPR1Q14643 2758 aa14.02□□□□□ -0.17
TPM1-220ENST00000559556 C2orf78A6NCI8 922 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 ATP2C2O75185 946 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 PRPF6O94906 941 aaKnown RBP14.01□□□□□ -0.17
TPM1-220ENST00000559556 APBB3O95704 486 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 TNNC2P02585 160 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 PFKLP17858 780 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 MPLP40238 635 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 PDE6CP51160 858 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 CEBPZQ03701 1054 aaKnown RBP14.01□□□□□ -0.17
TPM1-220ENST00000559556 DMC1Q14565 340 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 SLC39A14Q15043 492 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 SURF1Q15526 300 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 MAPRE1Q15691 268 aaKnown RBP14.01□□□□□ -0.17
TPM1-220ENST00000559556 SCN4BQ8IWT1 228 aa14.01□□□□□ -0.17
TPM1-220ENST00000559556 CCDC65Q8IXS2 484 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms