RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 PCDHB4Q9Y5E5 795 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 BECN2A8MW95 431 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 C2CD4DB7Z1M9 353 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 MOSPD3O75425 235 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 HMGA1P17096 107 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 MTMR3Q13615 1198 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 VEPH1Q14D04 833 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 POTEHQ6S545 545 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 ITIH5Q86UX2 942 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 LUZP1Q86V48 1076 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 ANKRD20A12PQ8NF67 263 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 C8orf48Q96LL4 319 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 UHRF1Q96T88 793 aaPredicted RBP21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 APEX2Q9UBZ4 518 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 USTQ9Y2C2 406 aa21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 MRPS23Q9Y3D9 190 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-207ENST00000559494 MYH10P35580 1976 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 SLC38A8A6NNN8 435 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 F8VP50 259 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 CAVIN2O95810 425 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 TPM2P07951 284 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 MYL4P12829 197 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 PPP1R26Q5T8A7 1209 aaPredicted RBP21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 CYP4A22Q5TCH4 519 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 TMEM270Q6UE05 265 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 GET4Q7L5D6 327 aaPredicted RBP21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 OTOP3Q7RTS5 596 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 SPATA17Q96L03 361 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 KCNK16Q96T55 309 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 DNAI2Q9GZS0 605 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 ASAH2Q9NR71 780 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 AJAP1Q9UKB5 411 aaPredicted RBP21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 CNTN6Q9UQ52 1028 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 NR2E1Q9Y466 385 aa21.54■■□□□ 1.04
TSPAN3-207ENST00000559494 AP1G2O75843 785 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 BEST1O76090 585 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 CSH1P0DML2 217 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 CSH2P0DML3 217 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 TRIM21P19474 475 aaKnown RBP21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 ADORA2BP29275 332 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 MFAP3P55082 362 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 TAF12Q16514 161 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 LRSAM1Q6UWE0 723 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 GAREM2Q75VX8 874 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 PDZD4Q76G19 769 aaPredicted RBP21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 GJD3Q8N144 294 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 LEMD2Q8NC56 503 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 ZMIZ2Q8NF64 920 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 JAKMIP2Q96AA8 810 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 SMARCD1Q96GM5 515 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 SMOQ99835 787 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 IL21Q9HBE4 155 aa21.53■■□□□ 1.04
TSPAN3-207ENST00000559494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.53■■□□□ 1.041e-9■□□□□ 11
TSPAN3-207ENST00000559494 GREB1Q4ZG55 1949 aa21.52■■□□□ 1.04
TSPAN3-207ENST00000559494 ATP8B3O60423 1300 aa21.52■■□□□ 1.04
TSPAN3-207ENST00000559494 LGALS16A8MUM7 142 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 ZNF197O14709 1029 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 TRIM66O15016 1216 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 NOL4O94818 638 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 GJA1P17302 382 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 GBP2P32456 591 aaPredicted RBP21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 ARHGAP44Q17R89 818 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 KLHDC7AQ5VTJ3 777 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 ENOSF1Q7L5Y1 443 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 SHKBP1Q8TBC3 707 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 ING5Q8WYH8 240 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 FGF13Q92913 245 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 ACSF2Q96CM8 615 aaPredicted RBP21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 FAM81BQ96LP2 452 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 LSM14BQ9BX40 385 aaKnown RBP21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 CSNK1G1Q9HCP0 422 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 KRT82Q9NSB4 513 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 DNAJC12Q9UKB3 198 aa21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 MAGED2Q9UNF1 606 aaPredicted RBP21.52■■□□□ 1.03
TSPAN3-207ENST00000559494 MICAL2O94851 1124 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 CALCAP01258 141 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 PAEPP09466 180 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 CEBPBP17676 345 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 ANXA13P27216 316 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 GABRR2P28476 465 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 KLK7P49862 253 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 ZNF132P52740 706 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 FKBP15Q5T1M5 1219 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 ARHGAP17Q68EM7 881 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 ZDHHC14Q8IZN3 488 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 TDRD5Q8NAT2 981 aaKnown RBP21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 RBBP8NLQ8NC74 664 aaPredicted RBP21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 TFAP2BQ92481 460 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 MYRFLQ96LU7 910 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 CEP295NLQ96MC4 621 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 TSPY26PQ9H489 355 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 LIMD1Q9UGP4 676 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 CDH7Q9ULB5 785 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 KIAA1257Q9ULG3 409 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 SIK3Q9Y2K2 1263 aa21.51■■□□□ 1.03
TSPAN3-207ENST00000559494 BDP1A6H8Y1 2624 aa21.5■■□□□ 1.03
TSPAN3-207ENST00000559494 A0A1W2PRU2 124 aa21.5■■□□□ 1.03
TSPAN3-207ENST00000559494 F11P03951 625 aa21.5■■□□□ 1.03
TSPAN3-207ENST00000559494 VDRP11473 427 aa21.5■■□□□ 1.03
TSPAN3-207ENST00000559494 LAMP2P13473 410 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms