RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TMEM8AQ9HCN3 771 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 NDRG4Q9ULP0 352 aaKnown RBP12.98□□□□□ -0.33
CASC4-208ENST00000559151 GTF2A1LQ9UNN4 478 aa12.98□□□□□ -0.33
CASC4-208ENST00000559151 PRAMEF33A0A0G2JMD5 474 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 KRTAP23-1A1A580 65 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 M0R3H8 397 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 SH3BP5O60239 455 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 PRAMEF10O60809 474 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 PRKAG1P54619 331 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 DYRK1AQ13627 763 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 ARHGAP40Q5TG30 622 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 FAXCQ5TGI0 409 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 TMEM132CQ8N3T6 1108 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 TMEM125Q96AQ2 219 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 ADOQ96SZ5 270 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 PRPF18Q99633 342 aaKnown RBP12.97□□□□□ -0.33
CASC4-208ENST00000559151 ZNF768Q9H5H4 540 aaKnown RBP12.97□□□□□ -0.33
CASC4-208ENST00000559151 HPSEQ9Y251 543 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 FPGT-TNNI3KV9GXZ4 949 aa12.97□□□□□ -0.33
CASC4-208ENST00000559151 A0A1W2PS29 197 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 RGS10O43665 173 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 ITGB3P05106 788 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 CFIP05156 583 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 ITGA5P08648 1049 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 DHRS4L1P0CG22 281 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 FAM189BP81408 668 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 POU5F1BQ06416 359 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 FSTL1Q12841 308 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 SLC5A9Q2M3M2 681 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 HS1BP3Q53T59 392 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 SUGP1Q8IWZ8 645 aaKnown RBP12.96□□□□□ -0.33
CASC4-208ENST00000559151 ADGRG5Q8IZF4 528 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 DNAJB14Q8TBM8 379 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 EDAQ92838 391 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 GCC1Q96CN9 775 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 ITM2CQ9NQX7 267 aa12.96□□□□□ -0.33
CASC4-208ENST00000559151 RECQL4O94761 1208 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 NPTX2P47972 431 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 CXADRP78310 365 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 PPFIA1Q13136 1202 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 GEN1Q17RS7 908 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 MANEALQ5VSG8 457 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 MRNIPQ6NTE8 343 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 KRT73Q86Y46 540 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
CASC4-208ENST00000559151 RNF31Q96EP0 1072 aa12.95□□□□□ -0.34
CASC4-208ENST00000559151 F5H697 171 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 COQ9O75208 318 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 HSD3B1P14060 373 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 MST1P26927 711 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 FPGSQ05932 587 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 RBM20Q5T481 1227 aaKnown RBP12.94□□□□□ -0.34
CASC4-208ENST00000559151 SULT6B1Q6IMI4 303 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 RGS7BPQ6MZT1 257 aaPredicted RBP12.94□□□□□ -0.34
CASC4-208ENST00000559151 STT3BQ8TCJ2 826 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 KATNAL1Q9BW62 490 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 ZBTB26Q9HCK0 441 aa12.94□□□□□ -0.34
CASC4-208ENST00000559151 SPATA31A3Q5VYP0 1347 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
CASC4-208ENST00000559151 TAF5Q15542 800 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 CYP2A13Q16696 494 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 TIGD6Q17RP2 521 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 VPS53Q5VIR6 699 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 SPARTQ8N0X7 666 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 TMEM171Q8WVE6 324 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 SNX19Q92543 992 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 NACC2Q96BF6 587 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 SLC25A32Q9H2D1 315 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 GBA2Q9HCG7 927 aaPredicted RBP12.93□□□□□ -0.34
CASC4-208ENST00000559151 CASS4Q9NQ75 786 aa12.93□□□□□ -0.34
CASC4-208ENST00000559151 MYADML2A6NDP7 307 aa12.92□□□□□ -0.34
CASC4-208ENST00000559151 IPO5O00410 1097 aaKnown RBP12.92□□□□□ -0.34
CASC4-208ENST00000559151 NCR1O76036 304 aa12.92□□□□□ -0.34
CASC4-208ENST00000559151 CSF1RP07333 972 aa12.92□□□□□ -0.34
CASC4-208ENST00000559151 NPPBP16860 134 aa12.92□□□□□ -0.34
CASC4-208ENST00000559151 CD6P30203 668 aa12.92□□□□□ -0.34
CASC4-208ENST00000559151 PPIFP30405 207 aaKnown RBP12.92□□□□□ -0.34
CASC4-208ENST00000559151 HLXQ14774 488 aaPredicted RBP12.92□□□□□ -0.34
CASC4-208ENST00000559151 ALFQ53S48 1182 aa12.92□□□□□ -0.34
CASC4-208ENST00000559151 GATAD2AQ86YP4 633 aa12.92□□□□□ -0.34
CASC4-208ENST00000559151 GALNT15Q8N3T1 639 aa12.92□□□□□ -0.34
CASC4-208ENST00000559151 C9orf78Q9NZ63 289 aaPredicted RBP12.92□□□□□ -0.34
CASC4-208ENST00000559151 E2F2Q14209 437 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 RABL3Q5HYI8 236 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 ZNF585AQ6P3V2 769 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 MICALCLQ6ZW33 695 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 SLC15A3Q8IY34 581 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 EID2BQ96D98 161 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 FAM227BQ96M60 508 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 ST6GALNAC2Q9UJ37 374 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 SSX2IPQ9Y2D8 614 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 DTNAQ9Y4J8 743 aa12.91□□□□□ -0.34
CASC4-208ENST00000559151 A0A0B4J269 797 aa12.9□□□□□ -0.34
CASC4-208ENST00000559151 MARCH11A6NNE9 402 aa12.9□□□□□ -0.34
CASC4-208ENST00000559151 CD3EAPO15446 510 aaKnown RBP12.9□□□□□ -0.34
CASC4-208ENST00000559151 FAM20BO75063 409 aa12.9□□□□□ -0.34
CASC4-208ENST00000559151 USP1O94782 785 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms