RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 GJA1P17302 382 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 ELF1P32519 619 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 EXOC3L4Q17RC7 722 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 ATAT1Q5SQI0 421 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 STXBP5Q5T5C0 1151 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 PPP1R26Q5T8A7 1209 aaPredicted RBP12.16□□□□□ -0.46
SNX1-204ENST00000559061 IQCEQ6IPM2 695 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 GPRIN1Q7Z2K8 1008 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 DNAJB7Q7Z6W7 309 aaPredicted RBP12.16□□□□□ -0.46
SNX1-204ENST00000559061 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
SNX1-204ENST00000559061 NPAS3Q8IXF0 933 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 PPM1KQ8N3J5 372 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 ST13P5Q8NFI4 369 aaPredicted RBP12.16□□□□□ -0.46
SNX1-204ENST00000559061 SHKBP1Q8TBC3 707 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 TMEM176AQ96HP8 235 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 RIPOR3Q96MK2 946 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 NECTIN4Q96NY8 510 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 HNRNPABQ99729 332 aaKnown RBP12.16□□□□□ -0.46
SNX1-204ENST00000559061 CORO1BQ9BR76 489 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 NT5C1AQ9BXI3 368 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 COL25A1Q9BXS0 654 aaPredicted RBP12.16□□□□□ -0.46
SNX1-204ENST00000559061 MAGEC2Q9UBF1 373 aaPredicted RBP12.16□□□□□ -0.46
SNX1-204ENST00000559061 APEX2Q9UBZ4 518 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 FHOD1Q9Y613 1164 aa12.16□□□□□ -0.46
SNX1-204ENST00000559061 HELZP42694 1942 aaKnown RBP12.15□□□□□ -0.46
SNX1-204ENST00000559061 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 SLC38A8A6NNN8 435 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 TULP2O00295 520 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 GABBR2O75899 941 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 CFHP08603 1231 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 TBXAS1P24557 533 aaPredicted RBP12.15□□□□□ -0.46
SNX1-204ENST00000559061 TUFMP49411 452 aaKnown RBP12.15□□□□□ -0.46
SNX1-204ENST00000559061 PGFP49763 221 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 ZNF445P59923 1031 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 PABPC1LQ4VXU2 614 aaKnown RBP12.15□□□□□ -0.46
SNX1-204ENST00000559061 PKDCCQ504Y2 493 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 KLHDC7AQ5VTJ3 777 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 ARHGAP17Q68EM7 881 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 LRSAM1Q6UWE0 723 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 VSTM1Q6UX27 236 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 C4orf50Q6ZRC1 276 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 CLEC20AQ6ZU45 233 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 GET4Q7L5D6 327 aaPredicted RBP12.15□□□□□ -0.46
SNX1-204ENST00000559061 TTC30AQ86WT1 665 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 CCDC150Q8NCX0 1101 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 ING5Q8WYH8 240 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 SHC3Q92529 594 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 TNIP3Q96KP6 325 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 ZSWIM3Q96MP5 696 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 NAP1L5Q96NT1 182 aaPredicted RBP12.15□□□□□ -0.46
SNX1-204ENST00000559061 FAM124BQ9H5Z6 455 aaPredicted RBP12.15□□□□□ -0.46
SNX1-204ENST00000559061 CSNK1G1Q9HCP0 422 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.46
SNX1-204ENST00000559061 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 PRKAG3Q9UGI9 489 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 COL4A3Q01955 1670 aa12.15□□□□□ -0.46
SNX1-204ENST00000559061 TTC28Q96AY4 2481 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 MYO10Q9HD67 2058 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 O00370 1275 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 XYLBO75191 536 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 F11P03951 625 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 PTPN2P17706 415 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 FSHRP23945 695 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 FCARP24071 287 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 ADORA2BP29275 332 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 EPHB3P54753 998 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 PLD1Q13393 1074 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 MAPRE1Q15691 268 aaKnown RBP12.14□□□□□ -0.47
SNX1-204ENST00000559061 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 TMEM270Q6UE05 265 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 SCN4BQ8IWT1 228 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 RBBP8NLQ8NC74 664 aaPredicted RBP12.14□□□□□ -0.47
SNX1-204ENST00000559061 FAM200AQ8TCP9 573 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 FGF13Q92913 245 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 CYFIP2Q96F07 1278 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 RPGRIP1Q96KN7 1286 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 SPATA17Q96L03 361 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 C8orf48Q96LL4 319 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 MYRFLQ96LU7 910 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 TTLL2Q9BWV7 592 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 LSM14BQ9BX40 385 aaKnown RBP12.14□□□□□ -0.47
SNX1-204ENST00000559061 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
SNX1-204ENST00000559061 SMOC2Q9H3U7 446 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 PIDD1Q9HB75 910 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 IL37Q9NZH6 218 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 EPS15L1Q9UBC2 864 aa12.14□□□□□ -0.47
SNX1-204ENST00000559061 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 A0A1W2PRU2 124 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 AP1G2O75843 785 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 MYL4P12829 197 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
SNX1-204ENST00000559061 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
SNX1-204ENST00000559061 ALDH1A3P47895 512 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 JAM2P57087 298 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 CYP4F8P98187 520 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 CETN1Q12798 172 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 SYCP1Q15431 976 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 TEAD2Q15562 447 aa12.13□□□□□ -0.47
SNX1-204ENST00000559061 GAS2L3Q86XJ1 694 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms