RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 CISHQ9NSE2 258 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 PCDHB12Q9Y5F1 795 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 NLRC5Q86WI3 1866 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 ANKRD62A6NC57 917 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 AGPSO00116 658 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 HUS1O60921 280 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 FGFR3P22607 806 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 CTNNB1P35222 781 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 ORC1Q13415 861 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 NNTQ13423 1086 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 TCEAL1Q15170 157 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 RTP2Q5QGT7 225 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 DAAM2Q86T65 1068 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 TOP6BLQ8N6T0 577 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 APPL2Q8NEU8 664 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 LPIN3Q9BQK8 851 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 ACP6Q9NPH0 428 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 AAASQ9NRG9 546 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 GABRDO14764 452 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 CYP11A1P05108 521 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 DNAJB2P25686 324 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 MFAP3P55082 362 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 HADHBP55084 474 aaKnown RBP16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 ERVK-21P61565 698 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 CEP57Q86XR8 500 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 PALB2Q86YC2 1186 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 SHC3Q92529 594 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 FAXDC2Q96IV6 333 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 KRT12Q99456 494 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 ISCUQ9H1K1 167 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 OSGEPQ9NPF4 335 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 CHST7Q9NS84 486 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 TAS2R14Q9NYV8 317 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 PCDHB8Q9UN66 801 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 PLXNA4Q9HCM2 1894 aa16.78■□□□□ 0.28
CDC42BPB-204ENST00000559043 SF3B1O75533 1304 aaKnown RBP eCLIP16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 EPOPA6NHQ4 379 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 C5orf67F2Z3F1 127 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 CEP104O60308 925 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 BUB1BO60566 1050 aaPredicted RBP16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 HEXIM1O94992 359 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 PDGFRBP09619 1106 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 TBXAS1P24557 533 aaPredicted RBP16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 CDR1P51861 262 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 PLCB3Q01970 1234 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 CAMK1Q14012 370 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 MRPL58Q14197 206 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 CCDC142Q17RM4 750 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 ZNF394Q53GI3 561 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 RSPO2Q6UXX9 243 aaPredicted RBP16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 DPH6Q7L8W6 267 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 DDX53Q86TM3 631 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 FAM71AQ8IYT1 594 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 ADGRF2Q8IZF7 708 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 SPPL3Q8TCT6 385 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 TMEM169Q96HH4 297 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 TGS1Q96RS0 853 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 ELOVL4Q9GZR5 314 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 CYP3A43Q9HB55 503 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 MSRAQ9UJ68 235 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 AMFRQ9UKV5 643 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 CNTN6Q9UQ52 1028 aa16.77■□□□□ 0.28
CDC42BPB-204ENST00000559043 TRANK1O15050 2925 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 TMCO5BA8MYB1 307 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 PGRMC1O00264 195 aaKnown RBP16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 TRAPPC3O43617 180 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 ATP2C2O75185 946 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 CILPO75339 1184 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 P4HA1P13674 534 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 GGCXP38435 758 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 RNASE9P60153 205 aaKnown RBP16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 SMAD3P84022 425 aaKnown RBP16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 INCA1Q0VD86 236 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 RAB30Q15771 203 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 SLC20A1Q8WUM9 679 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 AUTS2Q8WXX7 1259 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 ARHGEF26Q96DR7 871 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 THAP2Q9H0W7 228 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 DPEP3Q9H4B8 488 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 EPB41L5Q9HCM4 733 aa16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 TTC7AQ9ULT0 858 aaPredicted RBP16.77■□□□□ 0.27
CDC42BPB-204ENST00000559043 MYO7AQ13402 2215 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 GRM6O15303 877 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 RNF40O75150 1001 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 OAZ2O95190 189 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 ODC1P11926 461 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 WARSP23381 471 aaKnown RBP16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 PAX3P23760 479 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 ACAT1P24752 427 aaKnown RBP16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 GNL1P36915 607 aaPredicted RBP16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 NDST1P52848 882 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 ERVFC1P60507 584 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 VPS52Q8N1B4 723 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 EIF1ADQ8N9N8 165 aaKnown RBP16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 OR6B3Q8NGW1 331 aa16.76■□□□□ 0.27
CDC42BPB-204ENST00000559043 TMEM209Q96SK2 561 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms