RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 LRRC32Q14392 662 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 ZNF268Q14587 947 aaPredicted RBP16.13■□□□□ 0.17
SMAD6-203ENST00000558937 ITPRIPL2Q3MIP1 535 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 MDH1BQ5I0G3 518 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 TDRD10Q5VZ19 366 aaKnown RBP16.13■□□□□ 0.17
SMAD6-203ENST00000558937 VSTM1Q6UX27 236 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 SLC9A9Q8IVB4 645 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 FSIP1Q8NA03 581 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 ZBTB44Q8NCP5 570 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 OR6B3Q8NGW1 331 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 MYCBPAPQ8TBZ2 947 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 PARD3BQ8TEW8 1205 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 SYAP1Q96A49 352 aaPredicted RBP16.13■□□□□ 0.17
SMAD6-203ENST00000558937 DPEP3Q9H4B8 488 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 TRPC7Q9HCX4 862 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 HPS4Q9NQG7 708 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 GKN1Q9NS71 199 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 RBM12Q9NTZ6 932 aaKnown RBP16.13■□□□□ 0.17
SMAD6-203ENST00000558937 TDP1Q9NUW8 608 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 ZSCAN32Q9NX65 697 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 NXF1Q9UBU9 619 aaKnown RBP16.13■□□□□ 0.17
SMAD6-203ENST00000558937 PCDHGA2Q9Y5H1 932 aa16.13■□□□□ 0.17
SMAD6-203ENST00000558937 HELZP42694 1942 aaKnown RBP16.13■□□□□ 0.17
SMAD6-203ENST00000558937 OTOGLQ3ZCN5 2332 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 PDXKO00764 312 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 NR3C1P04150 777 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 TDGF1P13385 188 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
SMAD6-203ENST00000558937 GRIK1P39086 918 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 GAS6Q14393 721 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 PON2Q15165 354 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 TRIM68Q6AZZ1 485 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 MAMSTRQ6ZN01 415 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 SUMF1Q8NBK3 374 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 SPATA17Q96L03 361 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 SLC22A12Q96S37 553 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 FAM83CQ9BQN1 747 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 SCAND2PQ9GZW5 306 aaPredicted RBP16.12■□□□□ 0.17
SMAD6-203ENST00000558937 GOLPH3LQ9H4A5 285 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 SMYD3Q9H7B4 428 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 VRTNQ9H8Y1 702 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 ATP6V1DQ9Y5K8 247 aa16.12■□□□□ 0.17
SMAD6-203ENST00000558937 USP34Q70CQ2 3546 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 TRAV19A0A0A6YYK7 116 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 A0A1W2PQ27 194 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 A0A1W2PQ64 194 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 A0A1W2PQD8 194 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 LILRB5O75023 590 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 CLSTN1O94985 981 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 CKMP06732 381 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 PTPN1P18031 435 aaKnown RBP16.11■□□□□ 0.17
SMAD6-203ENST00000558937 ANXA13P27216 316 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 CCR3P51677 355 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 AP3M2P53677 418 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 USP46P62068 366 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 CLDN10P78369 228 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 SATB1Q01826 763 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 FAM160A1Q05DH4 1040 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 USP4Q13107 963 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 ZNF699Q32M78 642 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 DGKKQ5KSL6 1271 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 KRBA2Q6ZNG9 492 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 Q6ZS52 159 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 DENND5BQ6ZUT9 1274 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 TMEM174Q8WUU8 243 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 ATRIPQ8WXE1 791 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 CEP295NLQ96MC4 621 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 EBF3Q9H4W6 596 aa16.11■□□□□ 0.17
SMAD6-203ENST00000558937 EP300Q09472 2414 aaPredicted RBP16.11■□□□□ 0.17
SMAD6-203ENST00000558937 C2orf78A6NCI8 922 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 A8MXQ7 604 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 F8VP50 259 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 TRIM66O15016 1216 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 RHOBTB3O94955 611 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 VNN1O95497 513 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 C4BPAP04003 597 aaKnown RBP16.1■□□□□ 0.17
SMAD6-203ENST00000558937 USP17L7P0C7H9 530 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 ARSAP15289 507 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 RAP1GAPP47736 663 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 CACNA2D1P54289 1103 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 DLG4P78352 724 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 DPYDQ12882 1025 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 RUNX3Q13761 415 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 NCOA4Q13772 614 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 MTF1Q14872 753 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 ZNF77Q15935 545 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 ZNF667Q5HYK9 610 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 CEP135Q66GS9 1140 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 CC2D1AQ6P1N0 951 aaPredicted RBP16.1■□□□□ 0.17
SMAD6-203ENST00000558937 SCARA5Q6ZMJ2 495 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 SPEM1Q8N4L4 309 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 CCDC47Q96A33 483 aaKnown RBP16.1■□□□□ 0.17
SMAD6-203ENST00000558937 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 C8orf48Q96LL4 319 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 CYP2S1Q96SQ9 504 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 HINFPQ9BQA5 517 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 TTLL2Q9BWV7 592 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 FAM126AQ9BYI3 521 aaPredicted RBP16.1■□□□□ 0.17
SMAD6-203ENST00000558937 ZNF518BQ9C0D4 1074 aa16.1■□□□□ 0.17
SMAD6-203ENST00000558937 ELOVL4Q9GZR5 314 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms