RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 KPNA7A9QM74 516 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 TULP2O00295 520 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 PHF2O75151 1096 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 GABBR2O75899 941 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 MLH1P40692 756 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 PTGIRP43119 386 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 RAB27AP51159 221 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 LILRA4P59901 499 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 TAP1Q03518 808 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 KLF1Q13351 362 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-207ENST00000558763 TXNRD3NBQ6F5E7 133 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 SLC24A5Q71RS6 500 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 MRPL10Q7Z7H8 261 aaKnown RBP13.66□□□□□ -0.22
SMAD3-207ENST00000558763 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 IFT20Q8IY31 132 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 KRT222Q8N1A0 295 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 UBA3Q8TBC4 463 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 FNIP1Q8TF40 1166 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 CAVIN3Q969G5 261 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 C18orf8Q96DM3 657 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 PIWIL1Q96J94 861 aaKnown RBP13.66□□□□□ -0.22
SMAD3-207ENST00000558763 ZNF560Q96MR9 790 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMAD3-207ENST00000558763 MIOSQ9NXC5 875 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 CACNG4Q9UBN1 327 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 NFU1Q9UMS0 254 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 C9IYK1 514 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 XPOTO43592 962 aaKnown RBP13.65□□□□□ -0.22
SMAD3-207ENST00000558763 FAM153BP0C7A2 387 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 LMO2P25791 158 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 PNPLA4P41247 253 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 TAF6P49848 677 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 EPHB4P54760 987 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 PSMC1P62191 440 aaKnown RBP13.65□□□□□ -0.22
SMAD3-207ENST00000558763 GOLGA7BQ2TAP0 167 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 FAM153CQ494X1 144 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 ATP13A4Q4VNC1 1196 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 ARHGAP17Q68EM7 881 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 TRNP1Q6NT89 227 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 EMBQ6PCB8 327 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 OSTM1Q86WC4 334 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 HACE1Q8IYU2 909 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 GAD1Q99259 594 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 TRIM51Q9BSJ1 452 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 NEUROG2Q9H2A3 272 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 ST7Q9NRC1 585 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 PCYOX1Q9UHG3 505 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 FAM153AQ9UHL3 310 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 HPCAL4Q9UM19 191 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 MICAL3Q7RTP6 2002 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 GOLGA6L10A0A0M3HER8 536 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 GOLGA8SH3BPF8 625 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 H3BQF6 201 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 ENPP3O14638 875 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-207ENST00000558763 LLGL1Q15334 1064 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 STILQ15468 1287 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 PPP2R5EQ16537 467 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 LRRC38Q5VT99 294 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 DDX42Q86XP3 938 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMAD3-207ENST00000558763 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 EIF1ADQ8N9N8 165 aaKnown RBP13.65□□□□□ -0.22
SMAD3-207ENST00000558763 VIPAS39Q9H9C1 493 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 METTL5Q9NRN9 209 aaKnown RBP13.65□□□□□ -0.22
SMAD3-207ENST00000558763 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 WDR35Q9P2L0 1181 aa13.65□□□□□ -0.22
SMAD3-207ENST00000558763 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-207ENST00000558763 E5RJQ4 531 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 ZNF623O75123 536 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 KRT3P12035 628 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 CHRNA3P32297 505 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 CBX1P83916 185 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 SLC25A11Q02978 314 aaKnown RBP13.64□□□□□ -0.23
SMAD3-207ENST00000558763 FPGSQ05932 587 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 IKBKEQ14164 716 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 SV2CQ496J9 727 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 PMF1Q6P1K2 205 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 DPH6Q7L8W6 267 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 MAATS1Q7Z4T9 603 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 EMC1Q8N766 993 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 C3orf58Q8NDZ4 430 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 EXD1Q8NHP7 514 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 SLC35F5Q8WV83 523 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 SLC4A5Q9BY07 1137 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 LRRC19Q9H756 370 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 LCMT1Q9UIC8 334 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 USTQ9Y2C2 406 aa13.64□□□□□ -0.23
SMAD3-207ENST00000558763 ARL5CA6NH57 179 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 LRCH4O75427 683 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 SKIP12755 728 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 DR1Q01658 176 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 NNTQ13423 1086 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 DHX34Q14147 1143 aaKnown RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 PIGHQ14442 188 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 CCDC142Q17RM4 750 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms