RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 CYP17A1P05093 508 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 CKMP06732 381 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 MCF2P10911 925 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 TYMPP19971 482 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 DDX6P26196 483 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMAD3-206ENST00000558739 LRPAP1P30533 357 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 MRPS21P82921 87 aaKnown RBP12.86□□□□□ -0.35
SMAD3-206ENST00000558739 MYO1EQ12965 1108 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 PPP2R5AQ15172 486 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 MPZL3Q6UWV2 235 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 FAM181AQ8N9Y4 354 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 SENP8Q96LD8 212 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 YTHDC1Q96MU7 727 aaKnown RBP12.86□□□□□ -0.35
SMAD3-206ENST00000558739 NACC1Q96RE7 527 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 OXCT2Q9BYC2 517 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-206ENST00000558739 SLC6A17Q9H1V8 727 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-206ENST00000558739 HSFX1Q9UBD0 423 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 CYP8B1Q9UNU6 501 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 PHLPP2Q6ZVD8 1323 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 SPTBN1Q01082 2364 aaKnown RBP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 NUMA1Q14980 2115 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 ARHGEF35A5YM69 484 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 BAG4O95429 457 aaKnown RBP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 HAPLN1P10915 354 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 XRCC6P12956 609 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 NPTX2P47972 431 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 TUFMP49411 452 aaKnown RBP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 BNC1Q01954 994 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 SEMG2Q02383 582 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 AAMPQ13685 434 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 KRT32Q14532 448 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 CCDC142Q17RM4 750 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 APBB1IPQ7Z5R6 666 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 RABEPKQ7Z6M1 372 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 MIB1Q86YT6 1006 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 ARL14EPQ8N8R7 260 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 LRRC15Q8TF66 581 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 TCHPQ9BT92 498 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 MRPL4Q9BYD3 311 aaKnown RBP12.85□□□□□ -0.35
SMAD3-206ENST00000558739 HAPLN2Q9GZV7 340 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 TMLHEQ9NVH6 421 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 ZMYM5Q9UJ78 669 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 HCN2Q9UL51 889 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 ITPR2Q14571 2701 aa12.85□□□□□ -0.35
SMAD3-206ENST00000558739 MYLKQ15746 1914 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 CCDC169A6NNP5 214 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 KAT7O95251 611 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 HMGB1P09429 215 aaKnown RBP12.84□□□□□ -0.35
SMAD3-206ENST00000558739 ODC1P11926 461 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 TNFSF9P41273 254 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 WASP42768 502 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 PEX3P56589 373 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 LILRA4P59901 499 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 SCRN1Q12765 414 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 ZBTB6Q15916 424 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 ECM1Q16610 540 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 DHRS13Q6UX07 377 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 RGL4Q8IZJ4 473 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 DAW1Q8N136 415 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 ZCCHC9Q8N567 271 aaKnown RBP12.84□□□□□ -0.35
SMAD3-206ENST00000558739 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
SMAD3-206ENST00000558739 LSM14AQ8ND56 463 aaKnown RBP12.84□□□□□ -0.35
SMAD3-206ENST00000558739 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 IFT74Q96LB3 600 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 MTMR9Q96QG7 549 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 GCNT4Q9P109 453 aa12.84□□□□□ -0.35
SMAD3-206ENST00000558739 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 BTBD18B2RXH4 712 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 CAPN9O14815 690 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 CILPO75339 1184 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 NFATC1O95644 943 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 NDUFV2P19404 249 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 KCNC4Q03721 635 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 NR1H3Q13133 447 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 STK3Q13188 491 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 TOB2Q14106 344 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-206ENST00000558739 NOLC1Q14978 699 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAD3-206ENST00000558739 SAFBQ15424 915 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAD3-206ENST00000558739 SMAD1Q15797 465 aaKnown RBP12.83□□□□□ -0.36
SMAD3-206ENST00000558739 DDR2Q16832 855 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 EOGTQ5NDL2 527 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 BLOC1S2Q6QNY1 142 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 SKAP1Q86WV1 359 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 FMNL3Q8IVF7 1028 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 TNFRSF25Q93038 417 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 PI4K2AQ9BTU6 479 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 GAREM1Q9H706 876 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAD3-206ENST00000558739 SNX14Q9Y5W7 946 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 SLCO1B1Q9Y6L6 691 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 STK36Q9NRP7 1315 aa12.83□□□□□ -0.36
SMAD3-206ENST00000558739 A0A1W2PQF6 199 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 TTC26A0AVF1 554 aa12.82□□□□□ -0.36
SMAD3-206ENST00000558739 NEMFO60524 1076 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms