RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ENGASEQ8NFI3 743 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 BPIFB1Q8TDL5 484 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 CSGALNACT1Q8TDX6 532 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 MSANTD3Q96H12 275 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 MAPK8IP1Q9UQF2 711 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 PIAS3Q9Y6X2 628 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 TICRRQ7Z2Z1 1910 aa16.54■□□□□ 0.24
CSHL1-208ENST00000558609 A8MXQ7 604 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 TADA3O75528 432 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 AKAP3O75969 853 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 NR2F2P24468 414 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 RPL13P26373 211 aaKnown RBP16.53■□□□□ 0.24
CSHL1-208ENST00000558609 AVPR1AP37288 418 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 GRIK1P39086 918 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 VAMP7P51809 220 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
CSHL1-208ENST00000558609 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 CYP27A1Q02318 531 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 ENPEPQ07075 957 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 SGSM1Q2NKQ1 1148 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 ZCWPW2Q504Y3 356 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 MDH1BQ5I0G3 518 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 TXNDC8Q6A555 127 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 C1orf228Q6PIY5 440 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 FAM3CQ92520 227 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 TAF4BQ92750 862 aa16.53■□□□□ 0.24
CSHL1-208ENST00000558609 SMG9Q9H0W8 520 aaKnown RBP16.53■□□□□ 0.24
CSHL1-208ENST00000558609 C8orf33Q9H7E9 229 aaPredicted RBP16.53■□□□□ 0.24
CSHL1-208ENST00000558609 THG1LQ9NWX6 298 aaKnown RBP16.53■□□□□ 0.24
CSHL1-208ENST00000558609 FAM186AA6NE01 2351 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 TRIM66O15016 1216 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 SP9P0CG40 484 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 CDH8P55286 799 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 FAM160A1Q05DH4 1040 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 ADAM9Q13443 819 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 PNOCQ13519 176 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 ZNF268Q14587 947 aaPredicted RBP16.52■□□□□ 0.24
CSHL1-208ENST00000558609 INTS8Q75QN2 995 aaKnown RBP16.52■□□□□ 0.24
CSHL1-208ENST00000558609 MAML2Q8IZL2 1156 aaPredicted RBP16.52■□□□□ 0.24
CSHL1-208ENST00000558609 B3GALNT2Q8NCR0 500 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 USP13Q92995 863 aaPredicted RBP16.52■□□□□ 0.24
CSHL1-208ENST00000558609 C8orf48Q96LL4 319 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 GSDMAQ96QA5 445 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 DPEP3Q9H4B8 488 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 SMYD3Q9H7B4 428 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 KIF9Q9HAQ2 790 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 TDP1Q9NUW8 608 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 SPATA6Q9NWH7 488 aaPredicted RBP16.52■□□□□ 0.24
CSHL1-208ENST00000558609 RMND1Q9NWS8 449 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 GVINP1Q7Z2Y8 2422 aa16.52■□□□□ 0.24
CSHL1-208ENST00000558609 PTPRDP23468 1912 aa16.52■□□□□ 0.23
CSHL1-208ENST00000558609 OBSL1O75147 1896 aa16.52■□□□□ 0.23
CSHL1-208ENST00000558609 GREB1Q4ZG55 1949 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 ASS1P00966 412 aaKnown RBP16.51■□□□□ 0.23
CSHL1-208ENST00000558609 P4HA1P13674 534 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 CCNE1P24864 410 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 ANXA13P27216 316 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 PSMC2P35998 433 aaKnown RBP16.51■□□□□ 0.23
CSHL1-208ENST00000558609 KPNA1P52294 538 aaPredicted RBP16.51■□□□□ 0.23
CSHL1-208ENST00000558609 EDRF1Q3B7T1 1238 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 DENND5BQ6ZUT9 1274 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 FAM186BQ8IYM0 893 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 ADSSL1Q8N142 457 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 SPATA20Q8TB22 786 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 NKD2Q969F2 451 aaPredicted RBP16.51■□□□□ 0.23
CSHL1-208ENST00000558609 ZFYVE19Q96K21 471 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 TIGD1Q96MW7 591 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 TTLL2Q9BWV7 592 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 B3GNT5Q9BYG0 378 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 ELOVL4Q9GZR5 314 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 SDCBP2Q9H190 292 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 GTSE1Q9NYZ3 720 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 EHD2Q9NZN4 543 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 FBXO4Q9UKT5 387 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 NDRG2Q9UN36 371 aaKnown RBP16.51■□□□□ 0.23
CSHL1-208ENST00000558609 CCL26Q9Y258 94 aa16.51■□□□□ 0.23
CSHL1-208ENST00000558609 F8VP50 259 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 LAMTOR5O43504 91 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 KRT13P13646 458 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 NOP14P78316 857 aaKnown RBP16.5■□□□□ 0.23
CSHL1-208ENST00000558609 ZNF528Q3MIS6 628 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 COBLL1Q53SF7 1204 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 MAMSTRQ6ZN01 415 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 ERMP1Q7Z2K6 904 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 RALGPS2Q86X27 583 aaPredicted RBP16.5■□□□□ 0.23
CSHL1-208ENST00000558609 SMYD4Q8IYR2 804 aaPredicted RBP16.5■□□□□ 0.23
CSHL1-208ENST00000558609 ELMO3Q96BJ8 720 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 TNIP3Q96KP6 325 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 FAM83CQ9BQN1 747 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 IER2Q9BTL4 223 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 ZNF518BQ9C0D4 1074 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 SEMA4AQ9H3S1 761 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 GKN1Q9NS71 199 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 GCNT4Q9P109 453 aa16.5■□□□□ 0.23
CSHL1-208ENST00000558609 ZNF638Q14966 1978 aaKnown RBP16.49■□□□□ 0.23
CSHL1-208ENST00000558609 WDR87Q6ZQQ6 2873 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 TRAV19A0A0A6YYK7 116 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 SPECC1L-ADORA2AF8WAN1 911 aa16.49■□□□□ 0.23
CSHL1-208ENST00000558609 CLDN5O00501 218 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms