RNA–Protein interactions for RNA: ENST00000558112.1

PSME1-204, Transcript of proteasome activator subunit 1, humanhuman

TSL 5

Gene PSME1, Length 651 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-204ENST00000558112 HMGB4Q8WW32 186 aa9.93□□□□□ -0.82
PSME1-204ENST00000558112 ZC3H10Q96K80 434 aaKnown RBP9.93□□□□□ -0.82
PSME1-204ENST00000558112 DUSP15Q9H1R2 295 aaPredicted RBP9.93□□□□□ -0.82
PSME1-204ENST00000558112 ABCB6Q9NP58 842 aa9.93□□□□□ -0.82
PSME1-204ENST00000558112 PCDHB13Q9Y5F0 798 aa9.93□□□□□ -0.82
PSME1-204ENST00000558112 BCLAF3A2AJT9 711 aaKnown RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 OTOL1A6NHN0 477 aaPredicted RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 C1QTNF9BB2RNN3 333 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 GIPC1O14908 333 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 KLF8O95600 359 aaPredicted RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 ADH1CP00326 375 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 LDHAP00338 332 aaKnown RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 F11P03951 625 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 PDGFRBP09619 1106 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 C1QTNF9P0C862 333 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 GAP43P17677 238 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 TIE1P35590 1138 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 PSMC1P62191 440 aaKnown RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 SHC2P98077 582 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 GTF2BQ00403 316 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 KDSRQ06136 332 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 RESTQ13127 1097 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 ZNF268Q14587 947 aaPredicted RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 MAPRE1Q15691 268 aaKnown RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 TRIM61Q5EBN2 209 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 WDR44Q5JSH3 913 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 NAIF1Q69YI7 327 aaPredicted RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 SDE2Q6IQ49 451 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 SV2BQ7L1I2 683 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 DEFB124Q8NES8 71 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 WHAMMQ8TF30 809 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 HVCN1Q96D96 273 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 ACBD6Q9BR61 282 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 PCIF1Q9H4Z3 704 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 FBRSL1Q9HCM7 1045 aaKnown RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 TMLHEQ9NVH6 421 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 ITGA11Q9UKX5 1188 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 ZMIZ1Q9ULJ6 1067 aa9.92□□□□□ -0.82
PSME1-204ENST00000558112 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.92□□□□□ -0.82
PSME1-204ENST00000558112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 LNP1A1A4G5 178 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 C2orf78A6NCI8 922 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 SOBPA7XYQ1 873 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.91□□□□□ -0.82
PSME1-204ENST00000558112 NOL4O94818 638 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 MBL2P11226 248 aaPredicted RBP9.91□□□□□ -0.82
PSME1-204ENST00000558112 HMGA1P17096 107 aaKnown RBP9.91□□□□□ -0.82
PSME1-204ENST00000558112 BDNFP23560 247 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 STAT6P42226 847 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 TNNC1P63316 161 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 CEBPZQ03701 1054 aaKnown RBP9.91□□□□□ -0.82
PSME1-204ENST00000558112 RABEP1Q15276 862 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 PREPLQ4J6C6 727 aaPredicted RBP9.91□□□□□ -0.82
PSME1-204ENST00000558112 EOGTQ5NDL2 527 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 PLA2G2CQ5R387 149 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 TDRD10Q5VZ19 366 aaKnown RBP9.91□□□□□ -0.82
PSME1-204ENST00000558112 SLC39A4Q6P5W5 647 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 DENND5BQ6ZUT9 1274 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 TMEFF1Q8IYR6 380 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 ALLCQ8N6M5 410 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 ZCCHC14Q8WYQ9 949 aaKnown RBP9.91□□□□□ -0.82
PSME1-204ENST00000558112 MYLPFQ96A32 169 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 HPDLQ96IR7 371 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 SLITRK1Q96PX8 696 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 SYT15Q9BQS2 421 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 MED10Q9BTT4 135 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 ADAM33Q9BZ11 813 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 MTMR12Q9C0I1 747 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 ARHGEF4Q9NR80 690 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 CFAP97Q9P2B7 532 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 EBF1Q9UH73 591 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 L1RE1Q9UN81 338 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 SH3BP1Q9Y3L3 701 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 PCDHB9Q9Y5E1 797 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 CEP295Q9C0D2 2601 aa9.91□□□□□ -0.82
PSME1-204ENST00000558112 PDCD11Q14690 1871 aaKnown RBP9.91□□□□□ -0.82
PSME1-204ENST00000558112 ATP8B3O60423 1300 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 ATXN2Q99700 1313 aaKnown RBP9.9□□□□□ -0.82
PSME1-204ENST00000558112 TCRBV21S2A2A0A5A6 115 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 TBC1D3BA6NDS4 549 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 PATE3B3GLJ2 98 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 LEFTY2O00292 366 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 TRIM66O15016 1216 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 FAM189A1O60320 539 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 PHACTR2O75167 634 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 DLATP10515 647 aaKnown RBP9.9□□□□□ -0.82
PSME1-204ENST00000558112 CEACAM1P13688 526 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 DPP6P42658 865 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 ZNF131P52739 623 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 IRX4P78413 519 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 SIM1P81133 766 aaPredicted RBP9.9□□□□□ -0.82
PSME1-204ENST00000558112 RPL6Q02878 288 aaKnown RBP9.9□□□□□ -0.82
PSME1-204ENST00000558112 GFPT1Q06210 699 aaPredicted RBP9.9□□□□□ -0.82
PSME1-204ENST00000558112 TRPC3Q13507 836 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 SF3A1Q15459 793 aaKnown RBP9.9□□□□□ -0.82
PSME1-204ENST00000558112 ZNF77Q15935 545 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 ANO4Q32M45 955 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 EML3Q32P44 896 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 MDH1BQ5I0G3 518 aa9.9□□□□□ -0.82
PSME1-204ENST00000558112 LYSMD4Q5XG99 296 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms