RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PAEPP09466 180 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 KRT5P13647 590 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 ANXA13P27216 316 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 KLK7P49862 253 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 CACNA2D1P54289 1103 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 PPP1R26Q5T8A7 1209 aaPredicted RBP27.11■■□□□ 1.93
SMAD6-202ENST00000557916 HS6ST3Q8IZP7 471 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 C8orf48Q96LL4 319 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 PCMTD1Q96MG8 357 aaPredicted RBP27.11■■□□□ 1.93
SMAD6-202ENST00000557916 ASAH2Q9NR71 780 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 KRT82Q9NSB4 513 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 AJAP1Q9UKB5 411 aaPredicted RBP27.11■■□□□ 1.93
SMAD6-202ENST00000557916 CNTN6Q9UQ52 1028 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 F8VP50 259 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 AP1G2O75843 785 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 CD19P15391 556 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 SGO2Q562F6 1265 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 CYP4A22Q5TCH4 519 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 RNF214Q8ND24 703 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 NAP1L5Q96NT1 182 aaPredicted RBP27.1■■□□□ 1.93
SMAD6-202ENST00000557916 ERGIC2Q96RQ1 377 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 TMEM30AQ9NV96 361 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 KIAA1257Q9ULG3 409 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 SIK3Q9Y2K2 1263 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 C5orf42Q9H799 3197 aa27.1■■□□□ 1.93
SMAD6-202ENST00000557916 A0A1B0GTH6 734 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 TEX33O43247 280 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 VDRP11473 427 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 UCHL3P15374 230 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 FSHRP23945 695 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 ZNF132P52740 706 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 FANCCQ00597 558 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 ARHGAP17Q68EM7 881 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 PDZD4Q76G19 769 aaPredicted RBP27.09■■□□□ 1.93
SMAD6-202ENST00000557916 LEMD2Q8NC56 503 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 STKLD1Q8NE28 680 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 SHC3Q92529 594 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 SPATA17Q96L03 361 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 KCNK16Q96T55 309 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 AVENQ9NQS1 362 aaPredicted RBP27.09■■□□□ 1.93
SMAD6-202ENST00000557916 FAM207AQ9NSI2 230 aaPredicted RBP27.09■■□□□ 1.93
SMAD6-202ENST00000557916 PRKAG3Q9UGI9 489 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 FHOD1Q9Y613 1164 aa27.09■■□□□ 1.93
SMAD6-202ENST00000557916 SLC38A8A6NNN8 435 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 FAM200BP0CF97 657 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 CSH1P0DML2 217 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 CSH2P0DML3 217 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 MYL4P12829 197 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 RFX1P22670 979 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 USP8P40818 1118 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 EPHA5P54756 1037 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 RPGRIP1Q96KN7 1286 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 CEP295NLQ96MC4 621 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 SMOQ99835 787 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 LRRC3Q9BY71 257 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 DMAP1Q9NPF5 467 aaPredicted RBP27.08■■□□□ 1.93
SMAD6-202ENST00000557916 MRPS23Q9Y3D9 190 aaKnown RBP27.08■■□□□ 1.93
SMAD6-202ENST00000557916 PTPRDP23468 1912 aa27.08■■□□□ 1.93
SMAD6-202ENST00000557916 SP100P23497 879 aaPredicted RBP27.07■■□□□ 1.92
SMAD6-202ENST00000557916 MTMR3Q13615 1198 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 RAPGEF1Q13905 1077 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 TMC8Q8IU68 726 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 ADHFE1Q8IWW8 467 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 NAA15Q9BXJ9 866 aaKnown RBP27.07■■□□□ 1.92
SMAD6-202ENST00000557916 GANQ9H2C0 597 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 ZNF334Q9HCZ1 680 aaPredicted RBP27.07■■□□□ 1.92
SMAD6-202ENST00000557916 MAGED2Q9UNF1 606 aaPredicted RBP27.07■■□□□ 1.92
SMAD6-202ENST00000557916 ZNF197O14709 1029 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 NOL4O94818 638 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 HMGA1P17096 107 aaKnown RBP27.07■■□□□ 1.92
SMAD6-202ENST00000557916 DRAP1Q14919 205 aaPredicted RBP27.07■■□□□ 1.92
SMAD6-202ENST00000557916 SLC5A9Q2M3M2 681 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 SMYD5Q6GMV2 418 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 GET4Q7L5D6 327 aaPredicted RBP27.07■■□□□ 1.92
SMAD6-202ENST00000557916 NEK11Q8NG66 645 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 ITFG1Q8TB96 612 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 CSNK1G1Q9HCP0 422 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 NR2E1Q9Y466 385 aa27.07■■□□□ 1.92
SMAD6-202ENST00000557916 DOCK6Q96HP0 2047 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 FOXN3O00409 490 aaPredicted RBP27.06■■□□□ 1.92
SMAD6-202ENST00000557916 BEST1O76090 585 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 CALCAP01258 141 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 CCR2P41597 374 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 MAP3K7CLP57077 242 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 NR1I3Q14994 352 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 PRSS36Q5K4E3 855 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 CLEC20AQ6ZU45 233 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 DENND5BQ6ZUT9 1274 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 OTOP3Q7RTS5 596 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 ZMIZ2Q8NF64 920 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 TFAP2BQ92481 460 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 TCEAL4Q96EI5 215 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 DUSP16Q9BY84 665 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.06■■□□□ 1.92
SMAD6-202ENST00000557916 TSPAN16Q9UKR8 245 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 USTQ9Y2C2 406 aa27.06■■□□□ 1.92
SMAD6-202ENST00000557916 EPHB6O15197 1021 aa27.05■■□□□ 1.92
SMAD6-202ENST00000557916 BRD2P25440 801 aaKnown RBP27.05■■□□□ 1.92
SMAD6-202ENST00000557916 GBP2P32456 591 aaPredicted RBP27.05■■□□□ 1.92
SMAD6-202ENST00000557916 UBASH3AP57075 661 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms