RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MYLK4Q86YV6 388 aaPredicted RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 ADGRG5Q8IZF4 528 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SPATA5Q8NB90 893 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 IPO4Q8TEX9 1081 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SECISBP2LQ93073 1101 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 PSMD1Q99460 953 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 MAGEB5Q9BZ81 275 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 UNKLQ9H9P5 680 aaKnown RBP2.06□□□□□ -2.08
HIF1A-212ENST00000557538 RASSF1Q9NS23 344 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SMPD4Q9NXE4 827 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 FAM50BQ9Y247 325 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 SSX2IPQ9Y2D8 614 aa2.06□□□□□ -2.08
HIF1A-212ENST00000557538 A8MVJ9 347 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 GPANK1O95872 356 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 PRKCBP05771 671 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CSF1RP07333 972 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CCT5P48643 541 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 MMP14P50281 582 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 RAP2BP61225 183 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SATB1Q01826 763 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ITIH3Q06033 890 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 RAB30Q15771 203 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 WDR53Q7Z5U6 358 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SH2D3CQ8N5H7 860 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 FAM46DQ8NEK8 389 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 PPM1EQ8WY54 764 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 KIAA1191Q96A73 305 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CTHRC1Q96CG8 243 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 TMEM176AQ96HP8 235 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 RMDN3Q96TC7 470 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 IMPG2Q9BZV3 1241 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 VPS11Q9H270 941 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CERS4Q9HA82 394 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SPON1Q9HCB6 807 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ZSCAN32Q9NX65 697 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF212Q9UDV6 495 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 NDRG4Q9ULP0 352 aaKnown RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 RUVBL1Q9Y265 456 aaKnown RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF536O15090 1300 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 FOXD2O60548 495 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 KIF20AO95235 890 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 FOSP01100 380 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CSTBP04080 98 aaKnown RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 PDIA3P30101 505 aaKnown RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 NPTX2P47972 431 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 KCNJ5P48544 419 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 PSMC1P62191 440 aaKnown RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ICA1Q05084 483 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 NSUN2Q08J23 767 aaKnown RBP eCLIP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 MYO1EQ12965 1108 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CCNIQ14094 377 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ACOX1Q15067 660 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 TSHZ3Q63HK5 1081 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 FOXR2Q6PJQ5 311 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ZDHHC24Q6UX98 284 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 UNC13DQ70J99 1090 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 RNF44Q7L0R7 432 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 MRGPREQ86SM8 312 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 GLIS1Q8NBF1 620 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 RNF169Q8NCN4 708 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SLC25A43Q8WUT9 341 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 RAB24Q969Q5 203 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 FAM136AQ96C01 138 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 TBATAQ96M53 351 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 PRRX2Q99811 253 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ALG8Q9BVK2 526 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CPA4Q9UI42 421 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 MYRFQ9Y2G1 1151 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SNX13Q9Y5W8 968 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 A0A1B0GVC2 190 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF185O15231 689 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SLC16A3O15427 465 aaKnown RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 MYBP10242 640 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 VEGFAP15692 232 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 LAG3P18627 525 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 FOLR3P41439 243 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CHAF1AQ13111 956 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SPARCL1Q14515 664 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ZIK1Q3SY52 487 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 FAM43BQ6ZT52 329 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 ANKS1BQ7Z6G8 1248 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SKAP1Q86WV1 359 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 IL17REQ8NFR9 667 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 RP9Q8TA86 221 aaKnown RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 OTUD7AQ8TE49 926 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 PDLIM2Q96JY6 352 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 NAP1L5Q96NT1 182 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SLC46A1Q96NT5 459 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 MS4A7Q9GZW8 240 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 CASS4Q9NQ75 786 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 SACM1LQ9NTJ5 587 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 KCTD5Q9NXV2 234 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 TMOD4Q9NZQ9 345 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 POGKQ9P215 609 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 MID2Q9UJV3 735 aa2.05□□□□□ -2.08
HIF1A-212ENST00000557538 USP15Q9Y4E8 981 aaPredicted RBP2.05□□□□□ -2.08
HIF1A-212ENST00000557538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.04□□□□□ -2.08
HIF1A-212ENST00000557538 GRID2IPA4D2P6 1211 aa2.04□□□□□ -2.08
HIF1A-212ENST00000557538 CCDC151A5D8V7 595 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms