RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 FRMD8P1Q9BZ68 369 aaPredicted RBP23.72■■□□□ 1.39
RCCD1-208ENST00000557266 SYNCQ9H7C4 482 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 CLUHO75153 1309 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 HBP1O60381 514 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 ITGB3P05106 788 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 NCALDP61601 193 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 PTPN11Q06124 597 aaPredicted RBP23.72■■□□□ 1.39
RCCD1-208ENST00000557266 MYO1EQ12965 1108 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 JADE1Q6IE81 842 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 CLMNQ96JQ2 1002 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 IFT122Q9HBG6 1241 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 WDR35Q9P2L0 1181 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 RBPJLQ9UBG7 517 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 PCSK1NQ9UHG2 260 aa23.72■■□□□ 1.39
RCCD1-208ENST00000557266 CILPO75339 1184 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 CSDE1O75534 798 aaKnown RBP23.71■■□□□ 1.39
RCCD1-208ENST00000557266 MICAL2O94851 1124 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 C22orf31O95567 290 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 STAG3L1P0CL83 205 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 MGAT5Q09328 741 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 ZNF268Q14587 947 aaPredicted RBP23.71■■□□□ 1.39
RCCD1-208ENST00000557266 TAF5Q15542 800 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 MSS51Q4VC12 460 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 PCGF5Q86SE9 256 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 PPIL6Q8IXY8 311 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 TTC13Q8NBP0 860 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 PAIP2Q9BPZ3 127 aaKnown RBP23.71■■□□□ 1.39
RCCD1-208ENST00000557266 WDR83Q9BRX9 315 aaKnown RBP23.71■■□□□ 1.39
RCCD1-208ENST00000557266 RNPEPQ9H4A4 650 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 KRT15P19012 456 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 EPHX2P34913 555 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 RPL22P35268 128 aaKnown RBP23.71■■□□□ 1.39
RCCD1-208ENST00000557266 FNBP1LQ5T0N5 605 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 SULF1Q8IWU6 871 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 C4orf33Q8N1A6 199 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 FITM2Q8N6M3 262 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 NAT8LQ8N9F0 302 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 MMP19Q99542 508 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 PLCD4Q9BRC7 762 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 PDGFCQ9NRA1 345 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 SLC24A2Q9UI40 661 aa23.71■■□□□ 1.39
RCCD1-208ENST00000557266 CFAP73A6NFT4 308 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 TXNP10599 105 aaKnown RBP23.7■■□□□ 1.38
RCCD1-208ENST00000557266 MIPP30301 263 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 SLC18A1P54219 525 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 BNIP1Q12981 228 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 RASA2Q15283 850 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 EFHC2Q5JST6 749 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 TBC1D1Q86TI0 1168 aaPredicted RBP23.7■■□□□ 1.38
RCCD1-208ENST00000557266 GBP7Q8N8V2 638 aaPredicted RBP23.7■■□□□ 1.38
RCCD1-208ENST00000557266 MRRFQ96E11 262 aaKnown RBP23.7■■□□□ 1.38
RCCD1-208ENST00000557266 MCRS1Q96EZ8 462 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 TMEM176AQ96HP8 235 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 FAXDC2Q96IV6 333 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 NFKBIZQ9BYH8 718 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 ECT2Q9H8V3 914 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 PRMT7Q9NVM4 692 aaPredicted RBP23.7■■□□□ 1.38
RCCD1-208ENST00000557266 GRID1Q9ULK0 1009 aa23.7■■□□□ 1.38
RCCD1-208ENST00000557266 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.7■■□□□ 1.38
RCCD1-208ENST00000557266 GABRB2P47870 512 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 KCTD2Q14681 263 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 AMHR2Q16671 573 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 FAM47EQ6ZV65 393 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 UNC45BQ8IWX7 931 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 CMASQ8NFW8 434 aaPredicted RBP23.69■■□□□ 1.38
RCCD1-208ENST00000557266 SMC6Q96SB8 1091 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 PITPNM3Q9BZ71 974 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 PPCSQ9HAB8 311 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 RXFP1Q9HBX9 757 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 SENP1Q9P0U3 644 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 PSMC3IPQ9P2W1 217 aaPredicted RBP23.69■■□□□ 1.38
RCCD1-208ENST00000557266 M0QYV0 167 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 MAGEB2O15479 319 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 IGBP1P78318 339 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 KCTD6Q8NC69 237 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 ZC3H15Q8WU90 426 aaKnown RBP23.69■■□□□ 1.38
RCCD1-208ENST00000557266 RSAD2Q8WXG1 361 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 SPOCK2Q92563 424 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 GRAMD1AQ96CP6 724 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 PHACTR1Q9C0D0 580 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 RABGEF1Q9UJ41 708 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 PNMA3Q9UL41 463 aa23.69■■□□□ 1.38
RCCD1-208ENST00000557266 SMG5Q9UPR3 1016 aaKnown RBP23.69■■□□□ 1.38
RCCD1-208ENST00000557266 A0A1W2PPM1 405 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 TCRBV7S3A2A0A539 114 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 RPA3P35244 121 aaPredicted RBP23.68■■□□□ 1.38
RCCD1-208ENST00000557266 GPD2P43304 727 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 ARL4CP56559 192 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 EFTUD2Q15029 972 aaKnown RBP eCLIP23.68■■□□□ 1.381e-6■■■□□ 15
RCCD1-208ENST00000557266 RNF43Q68DV7 783 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 RFX6Q8HWS3 928 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 TAB3Q8N5C8 712 aaPredicted RBP23.68■■□□□ 1.38
RCCD1-208ENST00000557266 ANKLE1Q8NAG6 615 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 HSPH1Q92598 858 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 ADAM33Q9BZ11 813 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 PDZD7Q9H5P4 517 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 ZMYND8Q9ULU4 1186 aaPredicted RBP23.68■■□□□ 1.38
RCCD1-208ENST00000557266 APOC4-APOC2K7ER74 178 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 TMEM63AO94886 807 aa23.68■■□□□ 1.38
RCCD1-208ENST00000557266 TRUB2O95900 331 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms