RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TRPC7Q9HCX4 862 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 CRTAC1Q9NQ79 661 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 AGPAT3Q9NRZ7 376 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 DENND4CQ5VZ89 1909 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 TRAV19A0A0A6YYK7 116 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 ATG13O75143 517 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 ZSCAN22P10073 491 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-213ENST00000557262 DLATP10515 647 aaKnown RBP16.99■□□□□ 0.31
TUBB3-213ENST00000557262 ARSAP15289 507 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 BDNFP23560 247 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 GNL1P36915 607 aaPredicted RBP16.99■□□□□ 0.31
TUBB3-213ENST00000557262 GRIK1P39086 918 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 GALK1P51570 392 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 PSMC1P62191 440 aaKnown RBP16.99■□□□□ 0.31
TUBB3-213ENST00000557262 EHHADHQ08426 723 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 SPEM2Q0P670 501 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 PSMD6Q15008 389 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 FSTL4Q6MZW2 842 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 HS2ST1Q7LGA3 356 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 WDR5BQ86VZ2 330 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 NELFCDQ8IXH7 590 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 XXYLT1Q8NBI6 393 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 RIN3Q8TB24 985 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 SCFD1Q8WVM8 642 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 CHFRQ96EP1 664 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 SLC22A12Q96S37 553 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 PARD6AQ9NPB6 346 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 FAM13BQ9NYF5 915 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 GCNT4Q9P109 453 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 PCDHA7Q9UN72 937 aa16.99■□□□□ 0.31
TUBB3-213ENST00000557262 UBE4BO95155 1302 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 MED19A0JLT2 244 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 LRP3O75074 770 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 TACC1O75410 805 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 HDCP19113 662 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 CYP2J2P51589 502 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 ATXN1P54253 815 aaKnown RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 CYP27A1Q02318 531 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 CYP24A1Q07973 514 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 SRSF5Q13243 272 aaKnown RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 MTF1Q14872 753 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 ATL3Q6DD88 541 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 ARL14EPQ8N8R7 260 aaPredicted RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 MYCBPAPQ8TBZ2 947 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 OSCP1Q8WVF1 389 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 MYLPFQ96A32 169 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 EXOC4Q96A65 974 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 CCDC127Q96BQ5 260 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 CGRRF1Q99675 332 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 BLZF1Q9H2G9 400 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 SNX25Q9H3E2 840 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 ECT2Q9H8V3 914 aa16.98■□□□□ 0.31
TUBB3-213ENST00000557262 FBRSL1Q9HCM7 1045 aaKnown RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 DUS2Q9NX74 493 aaKnown RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 CGNQ9P2M7 1197 aaKnown RBP16.98■□□□□ 0.31
TUBB3-213ENST00000557262 KIF26AQ9ULI4 1882 aaPredicted RBP16.97■□□□□ 0.31
TUBB3-213ENST00000557262 ZNF638Q14966 1978 aaKnown RBP16.97■□□□□ 0.31
TUBB3-213ENST00000557262 F13A1P00488 732 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 CKMP06732 381 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 HSP90AA1P07900 732 aaKnown RBP16.97■□□□□ 0.31
TUBB3-213ENST00000557262 DRD1P21728 446 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 ANXA13P27216 316 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 CASP1P29466 404 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 GJA4P35212 333 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 ME1P48163 572 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 NR1H3Q13133 447 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 ZNF77Q15935 545 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 WDR72Q3MJ13 1102 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 PKN3Q6P5Z2 889 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 DENND5BQ6ZUT9 1274 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 CEP68Q76N32 757 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 CPA6Q8N4T0 437 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 OR6B3Q8NGW1 331 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 ZNF516Q92618 1163 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 PCED1BQ96HM7 432 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 P2RY13Q9BPV8 354 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 MRPL45Q9BRJ2 306 aaKnown RBP16.97■□□□□ 0.31
TUBB3-213ENST00000557262 SLC39A2Q9NP94 309 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 EHD2Q9NZN4 543 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 SLC8A2Q9UPR5 921 aa16.97■□□□□ 0.31
TUBB3-213ENST00000557262 CCDC163A0A0D9SF12 145 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 C2orf78A6NCI8 922 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 TRIM66O15016 1216 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 EGFP01133 1207 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 TCF3P15923 654 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 PFKLP17858 780 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 PTPN1P18031 435 aaKnown RBP16.96■□□□□ 0.31
TUBB3-213ENST00000557262 HOXC13P31276 330 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 AFMP43652 599 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 IFNAR2P48551 515 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 PDE6CP51160 858 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 TRPC3Q13507 836 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 KCNB1Q14721 858 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 KNOP1Q1ED39 458 aaKnown RBP16.96■□□□□ 0.31
TUBB3-213ENST00000557262 BMT2Q1RMZ1 405 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 FBXO43Q4G163 708 aa16.96■□□□□ 0.31
TUBB3-213ENST00000557262 RESP18Q5W5W9 173 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms