RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 CD58P19256 250 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 MTHFRP42898 656 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 ALDH1A3P47895 512 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 RBM10P98175 930 aaKnown RBP17.43■□□□□ 0.38
PCNX4-213ENST00000556907 DUSP4Q13115 394 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 SMAD4Q13485 552 aaKnown RBP17.43■□□□□ 0.38
PCNX4-213ENST00000556907 ATAT1Q5SQI0 421 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 GPR149Q86SP6 731 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 TMTC1Q8IUR5 882 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 ELMOD1Q8N336 334 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 UBR7Q8N806 425 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 ATAD1Q8NBU5 361 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 ELMO3Q96BJ8 720 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 TMEM176AQ96HP8 235 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 PGLYRP2Q96PD5 576 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 CRTAC1Q9NQ79 661 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 ZKSCAN5Q9Y2L8 839 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 NME7Q9Y5B8 376 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 INSL5Q9Y5Q6 135 aa17.43■□□□□ 0.38
PCNX4-213ENST00000556907 SEC24AO95486 1093 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 PAEPP09466 180 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 HAPLN1P10915 354 aaPredicted RBP17.42■□□□□ 0.38
PCNX4-213ENST00000556907 SKILP12757 684 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 EPHB3P54753 998 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 PSMC1P62191 440 aaKnown RBP17.42■□□□□ 0.38
PCNX4-213ENST00000556907 RPL10AP62906 217 aaKnown RBP17.42■□□□□ 0.38
PCNX4-213ENST00000556907 ARHGAP44Q17R89 818 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 MDH1BQ5I0G3 518 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 ACOT1Q86TX2 421 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 WHAMMQ8TF30 809 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 PCED1BQ96HM7 432 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 ZNF830Q96NB3 372 aaPredicted RBP17.42■□□□□ 0.38
PCNX4-213ENST00000556907 ARID3AQ99856 593 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 ELOVL4Q9GZR5 314 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 TMLHEQ9NVH6 421 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 ABI2Q9NYB9 513 aaPredicted RBP17.42■□□□□ 0.38
PCNX4-213ENST00000556907 CNTN6Q9UQ52 1028 aa17.42■□□□□ 0.38
PCNX4-213ENST00000556907 SSU72P8A0A1W2PR75 194 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 H3BQ06 376 aaPredicted RBP17.41■□□□□ 0.38
PCNX4-213ENST00000556907 HCRTO43612 131 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 ATP2C2O75185 946 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 VNN2O95498 520 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 SERPING1P05155 500 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 ANXA13P27216 316 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 MRPS5P82675 430 aaKnown RBP17.41■□□□□ 0.38
PCNX4-213ENST00000556907 CYP27A1Q02318 531 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
PCNX4-213ENST00000556907 VEPH1Q14D04 833 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 MGAT5BQ3V5L5 792 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 RARS2Q5T160 578 aaKnown RBP17.41■□□□□ 0.38
PCNX4-213ENST00000556907 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 ITIH5Q86UX2 942 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 FAM71AQ8IYT1 594 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 LEMD2Q8NC56 503 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 MYLPFQ96A32 169 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 ZNF512Q96ME7 567 aaPredicted RBP17.41■□□□□ 0.38
PCNX4-213ENST00000556907 DPEP3Q9H4B8 488 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 PIDD1Q9HB75 910 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 YIPF1Q9Y548 306 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 PCDHB4Q9Y5E5 795 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 REV3LO60673 3130 aa17.41■□□□□ 0.38
PCNX4-213ENST00000556907 TRIM66O15016 1216 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 MBTPS2O43462 519 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 RFPL2O75678 378 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 GFPT2O94808 682 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 CCDC172P0C7W6 258 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 PNMA6AP0CW24 399 aaPredicted RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 VDRP11473 427 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 PTPN2P17706 415 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 ACO1P21399 889 aaKnown RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 RAD23BP54727 409 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 TWF1Q12792 350 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 STILQ15468 1287 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 TMC5Q6UXY8 1006 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 IRF2BP2Q7Z5L9 587 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 SUSD6Q92537 303 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 SMG7Q92540 1137 aaKnown RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 ZNF707Q96C28 371 aaPredicted RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 CYFIP2Q96F07 1278 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 HEXIM2Q96MH2 286 aaKnown RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 SEPT5Q99719 369 aaPredicted RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 HNRNPABQ99729 332 aaKnown RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 EHD2Q9NZN4 543 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 ARHGAP20Q9P2F6 1191 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 SLC27A5Q9Y2P5 690 aa17.4■□□□□ 0.38
PCNX4-213ENST00000556907 BZW2Q9Y6E2 419 aaKnown RBP17.4■□□□□ 0.38
PCNX4-213ENST00000556907 SOWAHDA6NJG2 315 aa17.39■□□□□ 0.37
PCNX4-213ENST00000556907 FOXN3O00409 490 aaPredicted RBP17.39■□□□□ 0.37
PCNX4-213ENST00000556907 FGF19O95750 216 aa17.39■□□□□ 0.37
PCNX4-213ENST00000556907 CYP2F1P24903 491 aa17.39■□□□□ 0.37
PCNX4-213ENST00000556907 KLHL30Q0D2K2 578 aa17.39■□□□□ 0.37
PCNX4-213ENST00000556907 SMAD2Q15796 467 aaKnown RBP17.39■□□□□ 0.37
PCNX4-213ENST00000556907 ZNF394Q53GI3 561 aa17.39■□□□□ 0.37
PCNX4-213ENST00000556907 TDRD12Q587J7 1177 aaKnown RBP17.39■□□□□ 0.37
PCNX4-213ENST00000556907 ARHGAP17Q68EM7 881 aa17.39■□□□□ 0.37
PCNX4-213ENST00000556907 PTCRAQ6ISU1 281 aaPredicted RBP17.39■□□□□ 0.37
PCNX4-213ENST00000556907 TMEM270Q6UE05 265 aa17.39■□□□□ 0.37
PCNX4-213ENST00000556907 CCDC170Q8IYT3 715 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms