RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RALGPS2Q86X27 583 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-236ENST00000556220 ZNF461Q8TAF7 563 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 ZSCAN18Q8TBC5 510 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-236ENST00000556220 TCP11Q8WWU5 503 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 E2F7Q96AV8 911 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 CEP170P1Q96L14 293 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 KRTAP4-12Q9BQ66 201 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 DUSP15Q9H1R2 295 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-236ENST00000556220 RBM8AQ9Y5S9 174 aaKnown RBP7.57□□□□□ -1.2
ATXN3-236ENST00000556220 ASCC3Q8N3C0 2202 aaKnown RBP7.57□□□□□ -1.2
ATXN3-236ENST00000556220 ZMYM2Q9UBW7 1377 aa7.57□□□□□ -1.2
ATXN3-236ENST00000556220 URB1O60287 2271 aaKnown RBP7.56□□□□□ -1.2
ATXN3-236ENST00000556220 A0A1B0GUA9 196 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 BCLAF3A2AJT9 711 aaKnown RBP7.56□□□□□ -1.2
ATXN3-236ENST00000556220 FAM221BA6H8Z2 402 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 SLC38A8A6NNN8 435 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 SPECC1L-ADORA2AF8WAN1 911 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 INO80B-WBP1J3KQ70 363 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 CDX4O14627 284 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-236ENST00000556220 SGSM2O43147 1006 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 ZBTB43O43298 467 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 RHOBTB1O94844 696 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 ABLIM3O94929 683 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 NPTXRO95502 500 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 IGHDP01880 384 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 THP07101 528 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 QARSP47897 775 aaKnown RBP7.56□□□□□ -1.2
ATXN3-236ENST00000556220 CREB5Q02930 508 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 MBTD1Q05BQ5 628 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 FCHO2Q0JRZ9 810 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 MXD4Q14582 209 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-236ENST00000556220 PON2Q15165 354 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 KIAA1211LQ6NV74 962 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 SLC27A1Q6PCB7 646 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 C19orf48Q6RUI8 117 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 ANKS3Q6ZW76 656 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 PROSER1Q86XN7 944 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 YAF2Q8IY57 180 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 BICD2Q8TD16 824 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 CCDC12Q8WUD4 166 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-236ENST00000556220 BHLHE41Q9C0J9 482 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-236ENST00000556220 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 RWDD1Q9H446 243 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-236ENST00000556220 TMEM9BQ9NQ34 198 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 SLC8A2Q9UPR5 921 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 ITPR1Q14643 2758 aa7.56□□□□□ -1.2
ATXN3-236ENST00000556220 NCANO14594 1321 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 CYP3A7-CYP3A51PA0A087WV96 503 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 LNP1A1A4G5 178 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 TMEM189-UBE2V1I3L0A0 370 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 PRRG1O14668 218 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 PTGESO14684 152 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 DKC1O60832 514 aaKnown RBP eCLIP7.55□□□□□ -1.2
ATXN3-236ENST00000556220 ATG13O75143 517 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 B3GAT3O94766 335 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 SEC24AO95486 1093 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 GSPT1P15170 499 aaKnown RBP7.55□□□□□ -1.2
ATXN3-236ENST00000556220 ATF2P15336 505 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 CYP3A7P24462 503 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 IRAK1P51617 712 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 EPHA5P54756 1037 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 GP2P55259 537 aaKnown RBP7.55□□□□□ -1.2
ATXN3-236ENST00000556220 ELF2Q15723 593 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 NAB2Q15742 525 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 HGSNATQ68CP4 663 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 IQCEQ6IPM2 695 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 SLC8B1Q6J4K2 584 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 PKN3Q6P5Z2 889 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 CD300LGQ6UXG3 332 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 CDR2LQ86X02 465 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-236ENST00000556220 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 TCEAL8Q8IYN2 117 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 CAMKK1Q8N5S9 505 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 DEFB124Q8NES8 71 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 TTC8Q8TAM2 541 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 SHKBP1Q8TBC3 707 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 RSPRY1Q96DX4 576 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 ZNF512Q96ME7 567 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-236ENST00000556220 BBC3Q96PG8 261 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-236ENST00000556220 TMPRSS13Q9BYE2 586 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 CYP4F11Q9HBI6 524 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 CYP4F12Q9HCS2 524 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 KLK13Q9UKR3 277 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 BRPF3Q9ULD4 1205 aa7.55□□□□□ -1.2
ATXN3-236ENST00000556220 ABCA7Q8IZY2 2146 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 EIF4E1BA6NMX2 242 aaKnown RBP7.54□□□□□ -1.2
ATXN3-236ENST00000556220 SLC27A2O14975 620 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 DCLK1O15075 740 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 B4GALT5O43286 388 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 TRAPPC3O43617 180 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 FZD6O60353 706 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 P4HBP07237 508 aaKnown RBP7.54□□□□□ -1.2
ATXN3-236ENST00000556220 GJA1P17302 382 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 IGFBP6P24592 240 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-236ENST00000556220 TKTP29401 623 aaKnown RBP7.54□□□□□ -1.2
ATXN3-236ENST00000556220 FGD1P98174 961 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 ROR1Q01973 937 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 TFDP1Q14186 410 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 EMC2Q15006 297 aa7.54□□□□□ -1.2
ATXN3-236ENST00000556220 TEAD2Q15562 447 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms