RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907		H7C4K7	107 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907		I3L4J1	428 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	ARHGAP6	O43182	974 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	CLSTN1	O94985	981 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	LCA5L	O95447	670 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	SOD2	P04179	222 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	ASGR2	P07307	311 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	PNMA6A	P0CW24	399 aa	Predicted RBP	12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	CTSA	P10619	480 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	SKIL	P12757	684 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	LMO2	P25791	158 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	CCZ1B	P86790	482 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	CCZ1	P86791	482 aa	Predicted RBP	12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	STIL	Q15468	1287 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	ARHGAP17	Q68EM7	881 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	OVOS1	Q6IE37	1185 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	FAM171B	Q6P995	826 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	SYCE2	Q6PIF2	218 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	SLC47A2	Q86VL8	602 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	TMEM105	Q8N8V8	129 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	SLC30A5	Q8TAD4	765 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	EPS8L1	Q8TE68	723 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	HASPIN	Q8TF76	798 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	CASP10	Q92851	521 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	TWNK	Q96RR1	684 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	RTP3	Q9BQQ7	232 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	TTPAL	Q9BTX7	342 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	HERC2P3	Q9BVR0	1158 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	VN1R3	Q9BXE9	311 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	IRF2BPL	Q9H1B7	796 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	MFSD1	Q9H3U5	465 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	DDX43	Q9NXZ2	648 aa	Known RBP	12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	PCDHGC3	Q9UN70	934 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	BACE2	Q9Y5Z0	518 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	HCFC2	Q9Y5Z7	792 aa		12.01	□□□□□ -0.49
RAD51B-222	ENST00000555907	OR6C75	A6NL08	312 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	C2CD4D	B7Z1M9	353 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	MED7	O43513	233 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	LILRB3	O75022	631 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	PDGFRB	P09619	1106 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	GZMA	P12544	262 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	HOXB8	P17481	243 aa	Predicted RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	CHRNB2	P17787	502 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	PTPN1	P18031	435 aa	Known RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	TKT	P29401	623 aa	Known RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	GNA15	P30679	374 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	EIF4A3	P38919	411 aa	Known RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	PDE6C	P51160	858 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	DSG1	Q02413	1049 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	ARID5A	Q03989	594 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	YWHAH	Q04917	246 aa	Predicted RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	VARS2	Q5ST30	1063 aa	Known RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	KIAA0319	Q5VV43	1072 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	LCLAT1	Q6UWP7	414 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	TRIM72	Q6ZMU5	477 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	ANKS3	Q6ZW76	656 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	TAS1R1	Q7RTX1	841 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	NOP9	Q86U38	636 aa	Known RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	VPS36	Q86VN1	386 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	MYCBPAP	Q8TBZ2	947 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	PIK3R5	Q8WYR1	880 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	TFAP2B	Q92481	460 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	CCDC42	Q96M95	316 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	HEXIM2	Q96MH2	286 aa	Known RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	PKMYT1	Q99640	499 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	S1PR5	Q9H228	398 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	LHX5	Q9H2C1	402 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	KCNF1	Q9H3M0	494 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	HMGXB4	Q9UGU5	601 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	SSX2IP	Q9Y2D8	614 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	IRAK3	Q9Y616	596 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	EPN1	Q9Y6I3	576 aa	Predicted RBP	12	□□□□□ -0.49
RAD51B-222	ENST00000555907	CFAP54	Q96N23	3096 aa		12	□□□□□ -0.49
RAD51B-222	ENST00000555907	EIF3CL	B5ME19	914 aa	Known RBP	11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	DDX3X	O00571	662 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	PLEK	P08567	350 aa	Predicted RBP	11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	TNFAIP3	P21580	790 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	CDH5	P33151	784 aa	Predicted RBP	11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	DEK	P35659	375 aa	Known RBP	11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	CYLC1	P35663	651 aa	Predicted RBP	11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	ID4	P47928	161 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	FMO1	Q01740	532 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	SMARCB1	Q12824	385 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	MTMR3	Q13615	1198 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	PTPN14	Q15678	1187 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	MAPRE1	Q15691	268 aa	Known RBP	11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	SLC18A3	Q16572	532 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	ZNF394	Q53GI3	561 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	SGO2	Q562F6	1265 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	C10orf76	Q5T2E6	689 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	PPP1R2P3	Q6NXS1	205 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	ACOT1	Q86TX2	421 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	B3GALNT2	Q8NCR0	500 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	FLCN	Q8NFG4	579 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	OLIG1	Q8TAK6	271 aa		11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	LNX1	Q8TBB1	728 aa	Predicted RBP	11.99	□□□□□ -0.49
RAD51B-222	ENST00000555907	EIF3C	Q99613	913 aa	Known RBP	11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms