RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PRAMEF12O95522 483 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 TCF3P15923 654 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 PTPN1P18031 435 aaKnown RBP12.63□□□□□ -0.39
VRK1-204ENST00000555351 CD72P21854 359 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 NR2F2P24468 414 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 CASP4P49662 377 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 CYP4F8P98187 520 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 BIRC3Q13489 604 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 OR6B3Q8NGW1 331 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 FAM3CQ92520 227 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 MYLPFQ96A32 169 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 FAXDC2Q96IV6 333 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 TNIP3Q96KP6 325 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 TIGD1Q96MW7 591 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 LRRC3BQ96PB8 259 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 GSDMAQ96QA5 445 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 MRPL45Q9BRJ2 306 aaKnown RBP12.63□□□□□ -0.39
VRK1-204ENST00000555351 FAM126AQ9BYI3 521 aaPredicted RBP12.63□□□□□ -0.39
VRK1-204ENST00000555351 CHRDQ9H2X0 955 aa12.63□□□□□ -0.39
VRK1-204ENST00000555351 HOOK1Q9UJC3 728 aaKnown RBP12.63□□□□□ -0.39
VRK1-204ENST00000555351 ATP8B3O60423 1300 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 A8MXQ7 604 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 TADA3O75528 432 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 VNN1O95497 513 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 ASS1P00966 412 aaKnown RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 USP17L7P0C7H9 530 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 SP9P0CG40 484 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 BDNFP23560 247 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 ANXA13P27216 316 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 GTF2H1P32780 548 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 PSMC2P35998 433 aaKnown RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 GRIK1P39086 918 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 GPR15P49685 360 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 KPNA1P52294 538 aaPredicted RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 CYP27A1Q02318 531 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 FAM160A1Q05DH4 1040 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 LRRC32Q14392 662 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 FRMD5Q7Z6J6 570 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 UNC93AQ86WB7 457 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 SCN4BQ8IWT1 228 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 MAML2Q8IZL2 1156 aaPredicted RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 SYNPOQ8N3V7 929 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 MAB21L3Q8N8X9 362 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 B3GALNT2Q8NCR0 500 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 ENGASEQ8NFI3 743 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 SPATA20Q8TB22 786 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 NELL1Q92832 810 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 USP13Q92995 863 aaPredicted RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 FAM124BQ9H5Z6 455 aaPredicted RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 PRMT8Q9NR22 394 aaPredicted RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 SPATA6Q9NWH7 488 aaPredicted RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 NXF1Q9UBU9 619 aaKnown RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 MAGED2Q9UNF1 606 aaPredicted RBP12.62□□□□□ -0.39
VRK1-204ENST00000555351 GREB1Q4ZG55 1949 aa12.62□□□□□ -0.39
VRK1-204ENST00000555351 COL4A3Q01955 1670 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 SPECC1L-ADORA2AF8WAN1 911 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 HCRTO43612 131 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 LRRN2O75325 713 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 SMC2O95347 1197 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 KRT13P13646 458 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 TRIM21P19474 475 aaKnown RBP12.61□□□□□ -0.39
VRK1-204ENST00000555351 CTHP32929 405 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 VAMP7P51809 220 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 DLG4P78352 724 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 AMPD2Q01433 879 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 ADAM9Q13443 819 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 PPP2R5DQ14738 602 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 PDGFRLQ15198 375 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 ITPRIPL2Q3MIP1 535 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 MDH1BQ5I0G3 518 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 DGKKQ5KSL6 1271 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 C1orf220Q5T0J3 134 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 CEP135Q66GS9 1140 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 TXNDC8Q6A555 127 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 OVCA2Q8WZ82 227 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 IMPG2Q9BZV3 1241 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 COMMD8Q9NX08 183 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 NME7Q9Y5B8 376 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 PCDHGA2Q9Y5H1 932 aa12.61□□□□□ -0.39
VRK1-204ENST00000555351 STX10O60499 249 aa12.6□□□□□ -0.39
VRK1-204ENST00000555351 AKAP3O75969 853 aa12.6□□□□□ -0.39
VRK1-204ENST00000555351 RTN3O95197 1032 aaPredicted RBP12.6□□□□□ -0.39
VRK1-204ENST00000555351 PAPSS2O95340 614 aaPredicted RBP12.6□□□□□ -0.39
VRK1-204ENST00000555351 CHRNB1P11230 501 aa12.6□□□□□ -0.39
VRK1-204ENST00000555351 CCNE1P24864 410 aa12.6□□□□□ -0.39
VRK1-204ENST00000555351 CCR3P51677 355 aa12.6□□□□□ -0.39
VRK1-204ENST00000555351 CDR1P51861 262 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms