RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LRRC10BA6NIK2 292 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 H0Y858 1186 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 TRIM66O15016 1216 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 SEC24AO95486 1093 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 CSH1P0DML2 217 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 CSH2P0DML3 217 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-206ENST00000555046 FSHRP23945 695 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 ANXA13P27216 316 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 GRIK1P39086 918 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 MFAP3P55082 362 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 CYP27A1Q02318 531 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 GCNT1Q02742 428 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 CUL2Q13617 745 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 NFKBIBQ15653 356 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 ANO6Q4KMQ2 910 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 PABPC1LQ4VXU2 614 aaKnown RBP11.27□□□□□ -0.61
TMEM260-206ENST00000555046 SPOPLQ6IQ16 392 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 SCARA5Q6ZMJ2 495 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 GRASPQ7Z6J2 395 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-206ENST00000555046 OSTM1Q86WC4 334 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 FBXL6Q8N531 539 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 EDAQ92838 391 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 TATDN2Q93075 761 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 PSMG2Q969U7 264 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 NXPE3Q969Y0 559 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 ZNF707Q96C28 371 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-206ENST00000555046 TMEM176AQ96HP8 235 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 HEXIM2Q96MH2 286 aaKnown RBP11.27□□□□□ -0.61
TMEM260-206ENST00000555046 TMEM209Q96SK2 561 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 ELOVL4Q9GZR5 314 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 ASAH2Q9NR71 780 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 CISHQ9NSE2 258 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 SAMSN1Q9NSI8 373 aaKnown RBP11.27□□□□□ -0.61
TMEM260-206ENST00000555046 UXTQ9UBK9 157 aaPredicted RBP11.27□□□□□ -0.61
TMEM260-206ENST00000555046 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
TMEM260-206ENST00000555046 YIPF1Q9Y548 306 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 NAV2Q8IVL1 2488 aa11.27□□□□□ -0.61
TMEM260-206ENST00000555046 CILPO75339 1184 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 RHOP08100 348 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 CD58P19256 250 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 NBL1P41271 181 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 PPP3CCP48454 512 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 ZSCAN23Q3MJ62 389 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 FILIP1LQ4L180 1135 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 MDH1BQ5I0G3 518 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 C11orf57Q6ZUT1 292 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-206ENST00000555046 PDZD4Q76G19 769 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-206ENST00000555046 DNAJB7Q7Z6W7 309 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-206ENST00000555046 PPM1KQ8N3J5 372 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 PCED1BQ96HM7 432 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 RPGRIP1Q96KN7 1286 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 SPATA17Q96L03 361 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 GCNAQ96QF7 691 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 PKMYT1Q99640 499 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 CORO1BQ9BR76 489 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 MED10Q9BTT4 135 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.26□□□□□ -0.61
TMEM260-206ENST00000555046 COMMD8Q9NX08 183 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 GDE1Q9NZC3 331 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 GCNT4Q9P109 453 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 DNMT3BQ9UBC3 853 aaKnown RBP11.26□□□□□ -0.61
TMEM260-206ENST00000555046 DAAM1Q9Y4D1 1078 aa11.26□□□□□ -0.61
TMEM260-206ENST00000555046 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 SOBPA7XYQ1 873 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 GOLGA6L19H0YKK7 550 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 ATP2C2O75185 946 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 PAEPP09466 180 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 BDNFP23560 247 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 CYP2F1P24903 491 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 CDC25CP30307 473 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 RAP1GAPP47736 663 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 PSMC1P62191 440 aaKnown RBP11.25□□□□□ -0.61
TMEM260-206ENST00000555046 LRMPQ12912 555 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 STILQ15468 1287 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 ARHGAP15Q53QZ3 475 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 ACOT1Q86TX2 421 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 SCN4BQ8IWT1 228 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 ZDHHC14Q8IZN3 488 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 TDRD5Q8NAT2 981 aaKnown RBP11.25□□□□□ -0.61
TMEM260-206ENST00000555046 LMO3Q8TAP4 145 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 MYLPFQ96A32 169 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 CYFIP2Q96F07 1278 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 SMARCD1Q96GM5 515 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 C8orf48Q96LL4 319 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 HNRNPABQ99729 332 aaKnown RBP11.25□□□□□ -0.61
TMEM260-206ENST00000555046 INTS2Q9H0H0 1204 aaKnown RBP11.25□□□□□ -0.61
TMEM260-206ENST00000555046 SDCBP2Q9H190 292 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 POMKQ9H5K3 350 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 UBE2TQ9NPD8 197 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-206ENST00000555046 CRTAC1Q9NQ79 661 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 TMLHEQ9NVH6 421 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 CEP72Q9P209 647 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 LIMA1Q9UHB6 759 aaKnown RBP11.25□□□□□ -0.61
TMEM260-206ENST00000555046 CLUHO75153 1309 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 ATG2AQ2TAZ0 1938 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms