RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 TICRRQ7Z2Z1 1910 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 F8VZ95 297 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 ABLIM3O94929 683 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 TPM3P06753 285 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 CD58P19256 250 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 ACAT1P24752 427 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 ZNF75DP51815 510 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 MFAP3P55082 362 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 YWHAEP62258 255 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 GPR17Q13304 367 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 MTMR3Q13615 1198 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 GSE1Q14687 1217 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 PPM1LQ5SGD2 360 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 CWF19L1Q69YN2 538 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 FAM71AQ8IYT1 594 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 THEM5Q8N1Q8 247 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 B3GALNT2Q8NCR0 500 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 NEK11Q8NG66 645 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 ITFG1Q8TB96 612 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 SYT15Q9BQS2 421 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 RPP25Q9BUL9 199 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 NT5C1AQ9BXI3 368 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 STK33Q9BYT3 514 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 KCNK12Q9HB15 430 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 TMLHEQ9NVH6 421 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 CEP72Q9P209 647 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 EPS15L1Q9UBC2 864 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 DNMT3BQ9UBC3 853 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 KIF26AQ9ULI4 1882 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 PATJQ8NI35 1801 aa11.12□□□□□ -0.63
CCDC85C-203ENST00000554996 A0A1W2PQJ5 194 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 MYBPHLA2RUH7 354 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 A8MXQ7 604 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 FOXN3O00409 490 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 ATP2C2O75185 946 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 CLSTN1O94985 981 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 GYPCP04921 128 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 HOXA9P31269 272 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 GBP2P32456 591 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 CDR1P51861 262 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 ARPP19P56211 112 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 POLR2FP61218 127 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 HTR4Q13639 388 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 DRAP1Q14919 205 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 LIN9Q5TKA1 542 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 TPGS2Q68CL5 300 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 SPECC1LQ69YQ0 1117 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 OTOP3Q7RTS5 596 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 TTC9BQ8N6N2 239 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 RBBP8NLQ8NC74 664 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 OR6B3Q8NGW1 331 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 MYCBPAPQ8TBZ2 947 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 FGF14Q92915 247 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 PBXIP1Q96AQ6 731 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 IQCDQ96DY2 449 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 TNIP3Q96KP6 325 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 PHOX2BQ99453 314 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 ZSWIM1Q9BR11 485 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 EDEM3Q9BZQ6 932 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 TRIM5Q9C035 493 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 PIDD1Q9HB75 910 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 MAFFQ9ULX9 164 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 MYO6Q9UM54 1294 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 DUSP12Q9UNI6 340 aa11.11□□□□□ -0.63
CCDC85C-203ENST00000554996 NCANO14594 1321 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 GREB1Q4ZG55 1949 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 MTMR11A4FU01 709 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 PAEPP09466 180 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 PDGFRBP09619 1106 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 PNMA6AP0CW24 399 aaPredicted RBP11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 NPR3P17342 541 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 CEBPBP17676 345 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 PTPN1P18031 435 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 TRIM21P19474 475 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 CDC25BP30305 580 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 CLCN1P35523 988 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 CCR2P41597 374 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 TSPY1Q01534 308 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 SMARCB1Q12824 385 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 TBX2Q13207 712 aaPredicted RBP11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 ORC1Q13415 861 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 ARID5BQ14865 1188 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 ARHGAP44Q17R89 818 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 CFAP221Q4G0U5 840 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 TMEM270Q6UE05 265 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 CYP26C1Q6V0L0 522 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 RNF19BQ6ZMZ0 732 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 PAQR9Q6ZVX9 377 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 ACOT1Q86TX2 421 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 PLCD3Q8N3E9 789 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 FBXL6Q8N531 539 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 TMEM105Q8N8V8 129 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 ZNF461Q8TAF7 563 aa11.1□□□□□ -0.63
CCDC85C-203ENST00000554996 ING5Q8WYH8 240 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms